FFCP PHASE1:Hg19::chr21:47406856..47406869,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1291 | |EntrezGene=1291 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2211 | |HGNC=2211 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-153bp_to_ENST00000492851_5end | |association_with_transcript=-153bp_to_ENST00000492851_5end | ||
|cluster_id=chr21:47406856..47406869,+ | |||
|coexpression_cluster_id=C198 | |coexpression_cluster_id=C198 | ||
|description=CAGE_peak_15_at_COL6A1_5end | |description=CAGE_peak_15_at_COL6A1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!3.68e-38!180;CL:0000057!1.00e-25!75;CL:0000680!6.97e-13!57;CL:0000056!6.97e-13!57;CL:0000355!6.97e-13!57;CL:0000183!2.09e-12!59;CL:0000187!6.46e-12!54;CL:0000048!5.19e-11!430;CL:0000393!7.31e-11!60;CL:0000211!7.31e-11!60;CL:0000034!1.18e-10!444;CL:0000723!1.64e-10!436;CL:0000192!1.64e-09!42;CL:0000514!1.64e-09!42;CL:0000499!4.31e-09!27;CL:0000359!9.37e-09!32;CL:0002620!1.26e-08!23 | |ontology_enrichment_celltype=CL:0000055!3.68e-38!180;CL:0000057!1.00e-25!75;CL:0000680!6.97e-13!57;CL:0000056!6.97e-13!57;CL:0000355!6.97e-13!57;CL:0000183!2.09e-12!59;CL:0000187!6.46e-12!54;CL:0000048!5.19e-11!430;CL:0000393!7.31e-11!60;CL:0000211!7.31e-11!60;CL:0000034!1.18e-10!444;CL:0000723!1.64e-10!436;CL:0000192!1.64e-09!42;CL:0000514!1.64e-09!42;CL:0000499!4.31e-09!27;CL:0000359!9.37e-09!32;CL:0002620!1.26e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002559;1.67e-09;5!CL:0000057;1.06e-07;73!CL:0000499;1.48e-07;28!CL:0002320;2.29e-07;188!CL:0000134;2.61e-07;55!CL:0000135;4.24e-07;3!CL:0000388;4.24e-07;3!CL:0000723;4.68e-07;61 | |ontology_enrichment_celltype_v019=CL:0002559;1.67e-09;5!CL:0000057;1.06e-07;73!CL:0000499;1.48e-07;28!CL:0002320;2.29e-07;188!CL:0000134;2.61e-07;55!CL:0000135;4.24e-07;3!CL:0000388;4.24e-07;3!CL:0000723;4.68e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.69e-18,76;CL:0000048,4.11e-14,427;CL:0000723,1.30e-13,433;CL:0000034,5.72e-13,441;CL:0002320,4.48e-11,361;CL:0002559,1.08e-09,5;CL:0000134,2.54e-09,354;CL:0000219,5.58e-08,386;CL:0000499,1.92e-07,28;CL:0000135,3.76e-07,3;CL:0000388,3.76e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.44e-19!83;UBERON:0002329!6.44e-19!83;UBERON:0003077!6.44e-19!83;UBERON:0003059!6.44e-19!83;UBERON:0007282!6.44e-19!83;UBERON:0009618!6.44e-19!83;UBERON:0007285!6.44e-19!83;UBERON:0004290!8.79e-17!70;UBERON:0000486!1.55e-14!82;UBERON:0002385!1.38e-13!63;UBERON:0001015!1.38e-13!63;UBERON:0000383!1.38e-13!63;UBERON:0001134!4.44e-13!61;UBERON:0002036!4.44e-13!61;UBERON:0003082!4.44e-13!61;UBERON:0003102!5.30e-13!95;UBERON:0005256!8.83e-12!143;UBERON:0002199!6.05e-10!45;UBERON:0002416!6.05e-10!45;UBERON:0000475!1.48e-07!365;UBERON:0002097!3.03e-07!40;UBERON:0002100!4.43e-07!216 | |ontology_enrichment_uberon=UBERON:0000914!6.44e-19!83;UBERON:0002329!6.44e-19!83;UBERON:0003077!6.44e-19!83;UBERON:0003059!6.44e-19!83;UBERON:0007282!6.44e-19!83;UBERON:0009618!6.44e-19!83;UBERON:0007285!6.44e-19!83;UBERON:0004290!8.79e-17!70;UBERON:0000486!1.55e-14!82;UBERON:0002385!1.38e-13!63;UBERON:0001015!1.38e-13!63;UBERON:0000383!1.38e-13!63;UBERON:0001134!4.44e-13!61;UBERON:0002036!4.44e-13!61;UBERON:0003082!4.44e-13!61;UBERON:0003102!5.30e-13!95;UBERON:0005256!8.83e-12!143;UBERON:0002199!6.05e-10!45;UBERON:0002416!6.05e-10!45;UBERON:0000475!1.48e-07!365;UBERON:0002097!3.03e-07!40;UBERON:0002100!4.43e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0002073;1.67e-09;5!UBERON:0002384;3.49e-08;198!UBERON:0007846;4.24e-07;3!UBERON:0000043;4.24e-07;3!UBERON:0007845;4.24e-07;3!UBERON:0002072;7.12e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002073;1.67e-09;5!UBERON:0002384;3.49e-08;198!UBERON:0007846;4.24e-07;3!UBERON:0000043;4.24e-07;3!UBERON:0007845;4.24e-07;3!UBERON:0002072;7.12e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.59e-11,371;UBERON:0002073,1.08e-09,5;UBERON:0005086,1.08e-09,5;UBERON:0003102,1.92e-09,99;UBERON:0007524,3.57e-09,73;UBERON:0002329,1.14e-08,71;UBERON:0003059,1.14e-08,71;UBERON:0007282,1.14e-08,71;UBERON:0004290,1.14e-08,71;UBERON:0009618,1.14e-08,71;UBERON:0003077,1.81e-08,72;UBERON:0007285,1.81e-08,72;UBERON:0007503,2.25e-07,78;UBERON:0000486,2.57e-07,83;UBERON:0002199,3.23e-07,46;UBERON:0002416,3.23e-07,46;UBERON:0007846,3.76e-07,3;UBERON:0000043,3.76e-07,3;UBERON:0007845,3.76e-07,3;UBERON:0002072,4.60e-07,5 | |||
|phase1_expression=0.181678379270557,2.99740733447376,0.845726424575827,0,2.68176656656373,0,2.53299878168311,0.631719873426831,2.87304191019822,0,0,0,0,0.990130823680373,1.98838425436749,1.34465029290355,1.80808358407193,4.38186054232424,2.43966399395253,0.61560529038394,1.22400414746552,1.56727360739044,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.80719576192283,2.00535164254356,1.30361867064741,2.3858578411533,0.973269740605272,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.633152558322899,0.264818361626438,4.87622255272983,0,1.12135520028461,2.1349799145941,0.49333509683432,0,1.34710672069688,0.326923806226917,1.81628913173918,2.88087962239999,0.468642863667593,0.936480230490962,0,2.24173020827702,0.587172493218824,0.809364721840658,0.842704840213491,0.61246251376468,1.10550885580591,1.65321249881225,2.37600571456411,4.45080472701402,3.64064544775211,2.87447256726495,0.336672227908132,0.750711119231785,0,0.438977620880838,1.5324389789951,1.65261864797256,0.113432183160021,1.4351170855109,0.640672166455702,0.635795703478686,0.300091096084402,1.33968288009971,2.31876486041066,0.744467425326359,0.506328996723799,0.194874010322397,0.757301322732344,0.644349290496095,2.26304479546337,3.55009592516614,0.302256294682921,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0.464775771478074,0.207322110030741,0,0,1.56449532329816,9.00537313470039,1.38134921352481,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0.325808305310325,3.11980435583874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0.26593811658487,1.04007436911366,0,0,0.266422179016099,1.00084595560703,1.08524321078289,0.823240336780769,0.65147236858747,1.06617584622764,0,0,0,0.099972991182057,0,0,0,0.958499421966331,1.14861935834114,0,0.723906533337896,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,1.00034104211935,0.813795071099207,0.415941723061614,0.892144943985809,0.473107245101804,0.585707074963566,0.601892199455438,4.5481500811197,2.0694614258501,1.32845119707087,1.10621501125022,0.868836144680828,1.95801157462741,3.0882908142977,0,0,0,0,1.66435439510497,0,0.496215615637554,0.153461973288062,0.841980283299221,1.28139149255701,0,0.321707842287215,0,2.31314540703983,1.77561725313127,1.14978018419333,2.59627214591811,1.74315567689939,0,0,0,0.803701137152247,1.0925470080403,2.49136388422906,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0.183138929636687,0,0,0,0,0.96670718292122,0.616194468458578,1.07452572308291,0.827019434907183,0.537101224341368,1.74020032697074,1.02271952899321,0.979352392114111,0,0,0,0,0,1.25924938732256,0,0.308033580176089,0,0,1.48259375283136,0.286249773483982,0.372158369359667,0.632758849437452,1.33441135746677,0,0,1.90921948755562,1.56989728039846,0.539617372749944,1.09814811894422,0.471249609382746,0.404364963146632,0,1.26377536871694,0,0.487426979262569,1.05650146756755,0.682499557039929,1.97967604735198,1.13008116620243,0.551365343546124,0.66343897524122,0.876901770507525,1.73632660280006,0,0,0.30982349809975,0.563391205064483,0,0.196498082026242,0.35667105148125,0,1.26664581178598,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0.996239941255349,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.442317039724898,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0,0,0.873633341210151,0.343972064943233,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.0633107959558787,0,0,0.213452994739353,0.799238438328521,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0.199679000498991,0.858452096273142,0.223171457441873,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0,0.412618309791701,0.83088067605837,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0.653174720218818,0,0,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0.941063278792687,0,0,1.19403842309499,2.10341978862502,3.88364103051829,1.325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| ||
|short_description=p15@COL6A1 | |short_description=p15@COL6A1 | ||
}} | }} |
Latest revision as of 22:00, 18 September 2015
Short description: | p15@COL6A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_COL6A1_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | -153bp_to_ENST00000492851_5end |
EntrezGene: | COL6A1 |
HGNC: | 2211 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.69e-18 | 76 |
multi fate stem cell | 4.11e-14 | 427 |
somatic stem cell | 1.30e-13 | 433 |
stem cell | 5.72e-13 | 441 |
connective tissue cell | 4.48e-11 | 361 |
hair follicle cell | 1.08e-09 | 5 |
mesenchymal cell | 2.54e-09 | 354 |
motile cell | 5.58e-08 | 386 |
stromal cell | 1.92e-07 | 28 |
fibrocyte | 3.76e-07 | 3 |
tendon cell | 3.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.59e-11 | 371 |
hair follicle | 1.08e-09 | 5 |
hair follicle placode | 1.08e-09 | 5 |
surface structure | 1.92e-09 | 99 |
dense mesenchyme tissue | 3.57e-09 | 73 |
somite | 1.14e-08 | 71 |
presomitic mesoderm | 1.14e-08 | 71 |
presumptive segmental plate | 1.14e-08 | 71 |
dermomyotome | 1.14e-08 | 71 |
trunk paraxial mesoderm | 1.14e-08 | 71 |
paraxial mesoderm | 1.81e-08 | 72 |
presumptive paraxial mesoderm | 1.81e-08 | 72 |
epithelial vesicle | 2.25e-07 | 78 |
multilaminar epithelium | 2.57e-07 | 83 |
integument | 3.23e-07 | 46 |
integumental system | 3.23e-07 | 46 |
dense regular connective tissue | 3.76e-07 | 3 |
tendon | 3.76e-07 | 3 |
regular connective tissue | 3.76e-07 | 3 |
hypodermis | 4.60e-07 | 5 |