FFCP PHASE1:Hg19::chr18:21693134..21693139,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125488 | |EntrezGene=125488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26595 | |HGNC=26595 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1P2 | |UniProt=G3V1P2 | ||
|association_with_transcript=-177bp_to_ENST00000540918_5end | |association_with_transcript=-177bp_to_ENST00000540918_5end | ||
|cluster_id=chr18:21693134..21693139,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_21_at_TTC39C_5end | |description=CAGE_peak_21_at_TTC39C_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!3.85e-20!12;CL:0000417!3.85e-20!12;CL:0000668!3.85e-20!12;CL:0000414!3.85e-20!12;CL:0000412!3.85e-20!12;CL:0000182!3.85e-20!12;CL:1001319!1.46e-10!1;CL:1000600!1.46e-10!1;CL:0000223!1.98e-09!59 | |ontology_enrichment_celltype=CL:0000181!3.85e-20!12;CL:0000417!3.85e-20!12;CL:0000668!3.85e-20!12;CL:0000414!3.85e-20!12;CL:0000412!3.85e-20!12;CL:0000182!3.85e-20!12;CL:1001319!1.46e-10!1;CL:1000600!1.46e-10!1;CL:0000223!1.98e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.54e-12;12 | |ontology_enrichment_celltype_v019=CL:0000182;4.54e-12;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.54e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.52e-13;11!UBERON:0009497;3.21e-11;13 | |ontology_enrichment_development_v019=UBERON:0004161;4.52e-13;11!UBERON:0009497;3.21e-11;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!5.93e-30!25;UBERON:0000015!5.93e-30!25;UBERON:0002423!5.93e-30!25;UBERON:0006235!5.93e-30!25;UBERON:0004161!5.93e-30!25;UBERON:0002107!1.97e-24!19;UBERON:0006925!1.97e-24!19;UBERON:0008836!1.97e-24!19;UBERON:0008835!5.18e-21!22;UBERON:0003894!5.18e-21!22;UBERON:0009854!4.53e-20!23;UBERON:0007499!2.07e-18!25;UBERON:0005057!1.12e-17!26;UBERON:0009856!1.12e-17!26;UBERON:0002368!7.82e-17!35;UBERON:0003929!2.67e-16!54;UBERON:0005172!5.33e-16!55;UBERON:0005173!5.33e-16!55;UBERON:0005911!7.48e-15!82;UBERON:0002365!1.03e-14!31;UBERON:0002330!1.03e-14!31;UBERON:0002417!2.78e-14!61;UBERON:0000916!2.78e-14!61;UBERON:0002110!2.34e-13!3;UBERON:0006242!2.34e-13!3;UBERON:0000949!7.09e-13!45;UBERON:0005177!5.94e-11!107;UBERON:0001301!9.97e-11!1;UBERON:0000466!1.04e-10!126;UBERON:0004645!1.46e-10!1;UBERON:0001256!1.46e-10!1;UBERON:0001259!1.46e-10!1;UBERON:0002530!1.39e-09!59;UBERON:0009569!1.45e-08!113;UBERON:0003350!2.51e-08!5;UBERON:0001007!3.10e-08!155;UBERON:0001555!3.10e-08!155;UBERON:0007026!3.10e-08!155;UBERON:0000344!1.49e-07!12;UBERON:0004119!2.21e-07!169;UBERON:0000925!2.21e-07!169;UBERON:0006595!2.21e-07!169;UBERON:0000077!3.30e-07!130 | |ontology_enrichment_uberon=UBERON:0009497!5.93e-30!25;UBERON:0000015!5.93e-30!25;UBERON:0002423!5.93e-30!25;UBERON:0006235!5.93e-30!25;UBERON:0004161!5.93e-30!25;UBERON:0002107!1.97e-24!19;UBERON:0006925!1.97e-24!19;UBERON:0008836!1.97e-24!19;UBERON:0008835!5.18e-21!22;UBERON:0003894!5.18e-21!22;UBERON:0009854!4.53e-20!23;UBERON:0007499!2.07e-18!25;UBERON:0005057!1.12e-17!26;UBERON:0009856!1.12e-17!26;UBERON:0002368!7.82e-17!35;UBERON:0003929!2.67e-16!54;UBERON:0005172!5.33e-16!55;UBERON:0005173!5.33e-16!55;UBERON:0005911!7.48e-15!82;UBERON:0002365!1.03e-14!31;UBERON:0002330!1.03e-14!31;UBERON:0002417!2.78e-14!61;UBERON:0000916!2.78e-14!61;UBERON:0002110!2.34e-13!3;UBERON:0006242!2.34e-13!3;UBERON:0000949!7.09e-13!45;UBERON:0005177!5.94e-11!107;UBERON:0001301!9.97e-11!1;UBERON:0000466!1.04e-10!126;UBERON:0004645!1.46e-10!1;UBERON:0001256!1.46e-10!1;UBERON:0001259!1.46e-10!1;UBERON:0002530!1.39e-09!59;UBERON:0009569!1.45e-08!113;UBERON:0003350!2.51e-08!5;UBERON:0001007!3.10e-08!155;UBERON:0001555!3.10e-08!155;UBERON:0007026!3.10e-08!155;UBERON:0000344!1.49e-07!12;UBERON:0004119!2.21e-07!169;UBERON:0000925!2.21e-07!169;UBERON:0006595!2.21e-07!169;UBERON:0000077!3.30e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-28;19!UBERON:0006925;2.32e-28;19!UBERON:0002423;9.78e-22;25!UBERON:0002365;1.77e-17;31!UBERON:0002330;1.77e-17;31!UBERON:0002368;1.10e-14;33!UBERON:0000949;1.29e-10;43!UBERON:0005172;2.95e-08;52!UBERON:0005173;2.95e-08;52!UBERON:0002417;4.41e-07;58!UBERON:0000916;4.41e-07;58 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-28;19!UBERON:0006925;2.32e-28;19!UBERON:0002423;9.78e-22;25!UBERON:0002365;1.77e-17;31!UBERON:0002330;1.77e-17;31!UBERON:0002368;1.10e-14;33!UBERON:0000949;1.29e-10;43!UBERON:0005172;2.95e-08;52!UBERON:0005173;2.95e-08;52!UBERON:0002417;4.41e-07;58!UBERON:0000916;4.41e-07;58 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.32e-28,19;UBERON:0006925,2.32e-28,19;UBERON:0008836,2.32e-28,19;UBERON:0008835,1.34e-24,22;UBERON:0003894,1.34e-24,22;UBERON:0009854,1.46e-23,23;UBERON:0007499,9.78e-22,25;UBERON:0009497,9.78e-22,25;UBERON:0000015,9.78e-22,25;UBERON:0002423,9.78e-22,25;UBERON:0006235,9.78e-22,25;UBERON:0004161,9.78e-22,25;UBERON:0009856,6.29e-21,26;UBERON:0002365,1.15e-17,31;UBERON:0002330,1.15e-17,31;UBERON:0002368,1.01e-15,35;UBERON:0000949,2.30e-12,45;UBERON:0003929,2.12e-10,54;UBERON:0005172,2.12e-10,54;UBERON:0005173,2.12e-10,54;UBERON:0002530,1.45e-09,59;UBERON:0002417,2.06e-09,60;UBERON:0000916,2.06e-09,60;UBERON:0005911,5.11e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0,23.0408063605748,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.329663433524666,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.456939862637,7.95041333473328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0,23.0408063605748,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.329663433524666,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.456939862637,7.95041333473328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p21@TTC39C | |short_description=p21@TTC39C | ||
}} | }} |
Latest revision as of 00:37, 19 September 2015
Short description: | p21@TTC39C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_TTC39C_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -177bp_to_ENST00000540918_5end |
EntrezGene: | TTC39C |
HGNC: | 26595 |
UniProt: | G3V1P2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.54e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.32e-28 | 19 |
digestive gland | 2.32e-28 | 19 |
liver bud | 2.32e-28 | 19 |
hepatic diverticulum | 1.34e-24 | 22 |
liver primordium | 1.34e-24 | 22 |
digestive tract diverticulum | 1.46e-23 | 23 |
epithelial sac | 9.78e-22 | 25 |
epithelium of foregut-midgut junction | 9.78e-22 | 25 |
anatomical boundary | 9.78e-22 | 25 |
hepatobiliary system | 9.78e-22 | 25 |
foregut-midgut junction | 9.78e-22 | 25 |
septum transversum | 9.78e-22 | 25 |
sac | 6.29e-21 | 26 |
exocrine gland | 1.15e-17 | 31 |
exocrine system | 1.15e-17 | 31 |
endocrine gland | 1.01e-15 | 35 |
endocrine system | 2.30e-12 | 45 |
gut epithelium | 2.12e-10 | 54 |
abdomen element | 2.12e-10 | 54 |
abdominal segment element | 2.12e-10 | 54 |
gland | 1.45e-09 | 59 |
abdominal segment of trunk | 2.06e-09 | 60 |
abdomen | 2.06e-09 | 60 |
endo-epithelium | 5.11e-07 | 82 |