FFCP PHASE1:Hg19::chr19:56091568..56091589,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:56091568..56091589,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_at_chr19:56091568..56091589,- | |description=CAGE_peak_at_chr19:56091568..56091589,- | ||
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|ontology_enrichment_celltype=CL:0000055!3.26e-12!180;CL:0000220!1.29e-07!246;CL:0002321!1.34e-07!248;CL:0000057!1.37e-07!75 | |ontology_enrichment_celltype=CL:0000055!3.26e-12!180;CL:0000220!1.29e-07!246;CL:0002321!1.34e-07!248;CL:0000057!1.37e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000669;2.33e-12;4!CL:0000650;1.88e-07;2!CL:1000500;1.88e-07;2!CL:1000618;1.88e-07;2!CL:1001318;1.88e-07;2!CL:0002173;1.88e-07;2 | |ontology_enrichment_celltype_v019=CL:0000669;2.33e-12;4!CL:0000650;1.88e-07;2!CL:1000500;1.88e-07;2!CL:1000618;1.88e-07;2!CL:1001318;1.88e-07;2!CL:0002173;1.88e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000669,1.91e-12,4;CL:0000650,1.81e-07,2;CL:1000500,1.81e-07,2;CL:1000618,1.81e-07,2;CL:1001318,1.81e-07,2;CL:0002173,1.81e-07,2;CL:0002598,4.25e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.61e-10!365;UBERON:0000481!2.47e-07!347;UBERON:0005256!6.34e-07!143 | |ontology_enrichment_uberon=UBERON:0000475!1.61e-10!365;UBERON:0000481!2.47e-07!347;UBERON:0005256!6.34e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0003567;1.88e-07;2!UBERON:0003838;1.88e-07;2!UBERON:0003586;1.88e-07;2!UBERON:0005169;1.88e-07;2!UBERON:0002321;1.88e-07;2!UBERON:0005215;1.88e-07;2!UBERON:0002303;1.88e-07;2!UBERON:0002319;1.88e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0003567;1.88e-07;2!UBERON:0003838;1.88e-07;2!UBERON:0003586;1.88e-07;2!UBERON:0005169;1.88e-07;2!UBERON:0002321;1.88e-07;2!UBERON:0005215;1.88e-07;2!UBERON:0002303;1.88e-07;2!UBERON:0002319;1.88e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,1.81e-07,2;UBERON:0003838,1.81e-07,2;UBERON:0003586,1.81e-07,2;UBERON:0005169,1.81e-07,2;UBERON:0002321,1.81e-07,2;UBERON:0005215,1.81e-07,2;UBERON:0002303,1.81e-07,2;UBERON:0002319,1.81e-07,2 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,1.22866968250754,0.697801167972428,0.218441372130172,0.791300934685361,0.74259811776028,0.331397375727916,0,0,0.730310090387373,0,0.246242116153576,0.816002764977012,0.313454721478088,0.572471974262113,0.821246550437305,1.25542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,1.0843174571537,0.50133791063589,1.01392563272577,0,0,0.378139268656271,0.665188192387692,1.05401742831751,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.759783069987479,0.794455084879313,0,0.709336764396714,1.12135520028461,0,0.74000264525148,0.622422070799533,0,0.163461903113459,0.302714855289863,0.576175924479999,0.468642863667593,0,0,0.149448680551801,0,0,0,0.204154171254893,0.245668634623536,0.206651562351531,0,0,0,0,0.168336113954066,0.625592599359821,0.277064115484183,0,0.30648779579902,0.751190294532984,0.340296549480063,0.538168907066586,0.213557388818567,0.635795703478686,0.900273288253207,0.309157587715317,0.257640540045629,0.18611685633159,1.18143432568886,0.389748020644795,1.26216887122057,0.552299391853796,0.323292113637624,0,0.403008392910561,0.847802961552438,0.57978255948989,0.818238361772504,0.860413786167011,0,0.265059536642971,0,0.10366105501537,1.00928340350251,0,0,0.643240938192885,2.76269842704961,0.928735856063958,0,0,0.168584690078102,0,0.110293972732394,0.435758888184812,0,0,0.196221465125346,0,0,1.40241773803446,2.8810180793198,2.94017422771084,0,0.982827216677626,0,0,0.122988438543114,0.343135620597051,0.878002283269004,0,0,0,0.651616610620649,0,1.44331342025273,0.695582429850461,0.939269553886573,0.288732895522148,0,0,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0,0,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.775630294546667,0,0,1.06375246633948,1.04007436911366,0,1.41849132023278,0.266422179016099,0.285955987316295,1.08524321078289,0,0,0,0,5.12446941001296,0.871533458600294,5.39854152383108,0,0,0,0.479249710983165,2.29723871668228,0,0.579125226670317,0.410952645100767,0.537182889719687,0,0,0,0,0.76228387266739,0,0,0.335032530668698,0,0,0,0,0.49076596687656,0,0,0.415941723061614,1.42743191037729,0.946214490203608,0.702848489956279,0,0,0,1.32845119707087,0.368738337083406,0.347534457872331,1.17480694477644,1.37257369524342,0,0,0,0.303127571446259,3.32870879020994,0.604780586659361,0,0.767309866440312,0,0.128139149255701,1.02341449813341,0.482561763430822,0,0.308419387605311,0.710246901252508,0.164254312027618,0,0.232420756919918,0.846016147141356,1.00253235151642,0,0.34444334449382,0,0.524497659837696,0.451199612907412,0.539107359730903,2.35304930753057,0,0.527758144464379,0,0,0.431831832204279,0,2.43851793789468,3.51182841698397,0.509752546090077,0,1.11937377361089,0,0,0,0.984043937099117,0,0,0,0,0.574265537996172,1.95018073810956,0,0.386682873168488,0,0,0.137836572484531,0.107420244868274,0.290033387828457,0.170453254832202,0.623224249527161,0,0,0.255225424989168,0,0.464845549297286,0.31481234683064,0,0,0,2.60979897622522,0.37064843820784,0,0,0.949138274156178,0.762520775695299,1.79128453917934,1.71175595213568,0,0,0.719489830333259,0.54907405947211,0.235624804691373,0.808729926293264,0,0,0.48763373908959,0,0,0,0.282810863907425,0,1.10273068709225,0.66343897524122,0,0,1.31178950409327,0.202910376962704,0.30982349809975,0,0,0.785992328104969,1.426684205925,0,0.211107635297664,0,0,1.39973888097993,0.0962221127255121,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,3.31154620495167,0.962479855263359,0,0,0,0.0711418433484141,0,0,0.191505370132367,0.423347165447766,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0.728163130497081,0,0.284136146806413,0,0.296964680832639,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0.251932747854276,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,2.22273980289274,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0.173624994933292,0,0,0,0.221158519862449,0,0,0.10893846351899,0,0,0.113942055847001,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0.565412285735763,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0.728341138602278,0,1.20990716048664,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0.569219092059585,0.693373365065693,0.694238953340524,0,0,0,2.0638323896594,0.19351266257817,0.0730893170861856,0,0,21.7992632928006,0.225980740780532,0.137041924646751,0,0.0633107959558787,0,0,0,0.19980960958213,0,0.80175617316141,0.343189995723929,0,0.124252535565433,0,1.35904206073614,1.98745407993433,0.305994652908965,0.866851769704557,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.470284307407084,0.360299883542404,1.16495949527454,0.23634954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|short_description=p@chr19:56091568..56091589,- | |short_description=p@chr19:56091568..56091589,- | ||
}} | }} |
Latest revision as of 17:33, 27 July 2015
Short description: | p@chr19:56091568..56091589, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:56091568..56091589, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 1.91e-12 | 4 |
mesangial cell | 1.81e-07 | 2 |
kidney interstitial cell | 1.81e-07 | 2 |
juxtaglomerular complex cell | 1.81e-07 | 2 |
renal interstitial pericyte | 1.81e-07 | 2 |
extraglomerular mesangial cell | 1.81e-07 | 2 |
bronchial smooth muscle cell | 4.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 1.81e-07 | 2 |
abdominal segment connective tissue | 1.81e-07 | 2 |
trunk connective tissue | 1.81e-07 | 2 |
interstitial tissue | 1.81e-07 | 2 |
extraglomerular mesangium | 1.81e-07 | 2 |
kidney interstitium | 1.81e-07 | 2 |
juxtaglomerular apparatus | 1.81e-07 | 2 |
mesangium | 1.81e-07 | 2 |