FFCP PHASE1:Hg19::chr22:19165917..19166026,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:19165917..19166026,-
|short_description=p3@SLC25A1
|description=CAGE_peak_3_at_SLC25A1_5end
|association_with_transcript=0bp_to_ENST00000461267_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6576 | |EntrezGene=6576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10979 | |HGNC=10979 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000461267_5end | |||
|cluster_id=chr22:19165917..19166026,- | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_3_at_SLC25A1_5end | |||
|id=chr22:19165917..19166026,- | |||
|ontology_enrichment_celltype=CL:0000055!1.57e-33!180;CL:0002321!4.74e-24!248;CL:0000220!6.69e-24!246;CL:0000548!1.29e-21!679;CL:0000004!1.29e-21!679;CL:0000255!1.29e-21!679;CL:0000012!1.47e-20!682;CL:0000183!1.55e-20!59;CL:0000222!2.76e-20!119;CL:0000393!3.54e-19!60;CL:0000211!3.54e-19!60;CL:0000144!5.71e-19!625;CL:0000187!3.52e-18!54;CL:0000680!6.05e-18!57;CL:0000056!6.05e-18!57;CL:0000355!6.05e-18!57;CL:0002371!4.83e-17!591;CL:0000192!1.95e-15!42;CL:0000514!1.95e-15!42;CL:0000359!8.97e-12!32;CL:0000057!1.03e-11!75;CL:0000003!6.83e-11!722 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.20e-11;43!CL:0000359;4.13e-11;32!CL:0000187;4.36e-11;55!CL:0000393;3.58e-10;61!CL:0000211;3.58e-10;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.59e-24,250;CL:0000222,1.33e-20,121;CL:0000393,2.68e-19,61;CL:0000211,2.68e-19,61;CL:0000187,2.72e-18,55;CL:0000680,4.60e-18,58;CL:0000056,4.60e-18,58;CL:0000355,4.60e-18,58;CL:0000192,1.57e-15,43;CL:0000514,1.57e-15,43;CL:0000057,6.45e-12,76;CL:0000359,8.76e-12,32;CL:0000221,7.08e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000514;2.20e-11;43!CL:0000355;6.67e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.36e-19!83;UBERON:0002329!1.36e-19!83;UBERON:0003077!1.36e-19!83;UBERON:0003059!1.36e-19!83;UBERON:0007282!1.36e-19!83;UBERON:0009618!1.36e-19!83;UBERON:0007285!1.36e-19!83;UBERON:0005256!1.80e-19!143;UBERON:0004290!3.08e-18!70;UBERON:0000486!9.67e-18!82;UBERON:0002100!3.30e-16!216;UBERON:0003104!4.04e-15!238;UBERON:0009142!4.04e-15!238;UBERON:0001134!2.03e-14!61;UBERON:0002036!2.03e-14!61;UBERON:0003082!2.03e-14!61;UBERON:0002049!3.06e-14!79;UBERON:0007798!3.06e-14!79;UBERON:0002385!3.05e-13!63;UBERON:0001015!3.05e-13!63;UBERON:0000383!3.05e-13!63;UBERON:0003914!4.34e-13!118;UBERON:0000490!2.00e-12!138;UBERON:0004872!1.01e-11!84;UBERON:0000055!8.57e-11!69;UBERON:0001981!9.92e-11!60;UBERON:0007500!9.92e-11!60;UBERON:0004537!9.92e-11!60;UBERON:0006965!9.92e-11!60;UBERON:0000481!1.49e-10!347;UBERON:0001637!1.64e-10!42;UBERON:0003509!1.64e-10!42;UBERON:0004572!1.64e-10!42;UBERON:0000475!2.18e-10!365;UBERON:0000119!1.67e-09!312;UBERON:0004573!4.16e-09!33;UBERON:0004571!4.16e-09!33;UBERON:0000483!4.71e-09!309;UBERON:0004535!1.36e-08!110;UBERON:0001009!1.40e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.66e-08;33!UBERON:0004571;5.66e-08;33!UBERON:0001637;1.50e-07;42!UBERON:0003509;1.50e-07;42!UBERON:0004572;1.50e-07;42!UBERON:0003914;4.05e-07;74!UBERON:0006554;6.84e-07;30!UBERON:0001008;6.84e-07;30!UBERON:0007500;8.86e-07;56!UBERON:0001981;8.86e-07;56!UBERON:0004537;8.86e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.65e-21,78;UBERON:0003104,2.18e-20,160;UBERON:0009142,2.18e-20,160;UBERON:0002329,2.30e-18,71;UBERON:0003059,2.30e-18,71;UBERON:0007282,2.30e-18,71;UBERON:0004290,2.30e-18,71;UBERON:0009618,2.30e-18,71;UBERON:0007524,5.62e-18,73;UBERON:0000486,7.02e-18,83;UBERON:0003077,9.36e-18,72;UBERON:0007285,9.36e-18,72;UBERON:0005256,6.74e-16,122;UBERON:0000490,1.39e-15,148;UBERON:0002100,1.27e-14,199;UBERON:0001134,1.53e-14,62;UBERON:0002036,1.53e-14,62;UBERON:0003082,1.53e-14,62;UBERON:0002049,4.68e-14,78;UBERON:0007798,4.68e-14,78;UBERON:0002385,2.27e-13,64;UBERON:0001015,2.27e-13,64;UBERON:0000383,2.27e-13,64;UBERON:0003914,6.61e-13,117;UBERON:0004872,1.53e-11,83;UBERON:0000055,1.30e-10,68;UBERON:0007500,1.50e-10,59;UBERON:0001981,1.50e-10,59;UBERON:0004537,1.50e-10,59;UBERON:0006965,1.50e-10,59;UBERON:0001637,1.61e-10,42;UBERON:0003509,1.61e-10,42;UBERON:0004572,1.61e-10,42;UBERON:0000119,1.61e-09,309;UBERON:0004573,4.09e-09,33;UBERON:0004571,4.09e-09,33;UBERON:0000483,4.55e-09,306;UBERON:0004535,1.74e-08,109;UBERON:0001009,1.92e-07,112;UBERON:0003102,6.51e-07,99;UBERON:0002199,8.33e-07,46;UBERON:0002416,8.33e-07,46 | |||
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| ||
|short_description=p3@SLC25A1 | |||
}} | }} |
Latest revision as of 02:46, 19 September 2015
Short description: | p3@SLC25A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC25A1_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_ENST00000461267_5end |
EntrezGene: | SLC25A1 |
HGNC: | 10979 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.59e-24 | 250 |
mesodermal cell | 1.33e-20 | 121 |
electrically responsive cell | 2.68e-19 | 61 |
electrically active cell | 2.68e-19 | 61 |
muscle cell | 2.72e-18 | 55 |
muscle precursor cell | 4.60e-18 | 58 |
myoblast | 4.60e-18 | 58 |
multi-potent skeletal muscle stem cell | 4.60e-18 | 58 |
smooth muscle cell | 1.57e-15 | 43 |
smooth muscle myoblast | 1.57e-15 | 43 |
fibroblast | 6.45e-12 | 76 |
vascular associated smooth muscle cell | 8.76e-12 | 32 |
ectodermal cell | 7.08e-07 | 72 |