FFCP PHASE1:Hg19::chr12:117491808..117491811,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54997 | |EntrezGene=54997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26065 | |HGNC=26065 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000535198_5end | |association_with_transcript=-8bp_to_ENST00000535198_5end | ||
|cluster_id=chr12:117491808..117491811,- | |||
|coexpression_cluster_id=C56 | |coexpression_cluster_id=C56 | ||
|description=CAGE_peak_6_at_TESC_5end | |description=CAGE_peak_6_at_TESC_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000946!3.98e-14!1;CL:0000786!3.98e-14!1;CL:0000980!3.98e-14!1;CL:0000785!1.05e-07!2;CL:0000955!1.05e-07!2;CL:0000818!1.05e-07!2;CL:0000954!1.05e-07!2;CL:0000816!1.05e-07!2 | |ontology_enrichment_celltype=CL:0000946!3.98e-14!1;CL:0000786!3.98e-14!1;CL:0000980!3.98e-14!1;CL:0000785!1.05e-07!2;CL:0000955!1.05e-07!2;CL:0000818!1.05e-07!2;CL:0000954!1.05e-07!2;CL:0000816!1.05e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000946;4.66e-66;1!CL:0000786;4.66e-66;1 | |ontology_enrichment_celltype_v019=CL:0000946;4.66e-66;1!CL:0000786;4.66e-66;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000946,4.66e-66,1;CL:0000786,4.66e-66,1;CL:0000980,4.66e-66,1;CL:0000785,7.05e-34,2;CL:0000955,7.05e-34,2;CL:0000818,7.05e-34,2;CL:0000954,7.05e-34,2;CL:0000816,7.05e-34,2;CL:0000817,4.09e-23,3 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.23e-66;1!UBERON:0010227;2.39e-66;1!CL:0000954;7.05e-34;2!UBERON:0004872;8.16e-11;7 | |ontology_enrichment_development_v019=UBERON:0004140;1.23e-66;1!UBERON:0010227;2.39e-66;1!CL:0000954;7.05e-34;2!UBERON:0004872;8.16e-11;7 | ||
|ontology_enrichment_disease=DOID:2355!1.61e-13!1;DOID:74!2.12e-07!2 | |ontology_enrichment_disease=DOID:2355!1.61e-13!1;DOID:74!2.12e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004151!5.99e-18!3;UBERON:0002079!3.50e-14!1;UBERON:0002084!5.15e-14!1;UBERON:0002082!5.15e-14!1;UBERON:0004706!5.15e-14!1;UBERON:0001874!6.65e-14!1;UBERON:0002135!7.55e-14!1;UBERON:0001882!1.25e-13!1;UBERON:0005403!1.25e-13!1;UBERON:0002372!2.07e-13!1;UBERON:0001961!2.07e-13!1;UBERON:0001744!2.07e-13!1;UBERON:0001735!2.07e-13!1;UBERON:0000369!2.21e-13!4;UBERON:0002435!2.21e-13!4;UBERON:0000204!2.21e-13!4;UBERON:0010082!2.21e-13!4;UBERON:0007023!1.11e-11!115;UBERON:0007100!1.13e-11!27;UBERON:0000349!8.29e-11!5;UBERON:0000948!1.00e-08!24;UBERON:0005498!1.00e-08!24;UBERON:0004140!1.00e-08!24;UBERON:0009881!1.00e-08!24;UBERON:0004141!1.00e-08!24;UBERON:0003084!1.00e-08!24;UBERON:0007005!1.00e-08!24;UBERON:0004139!1.00e-08!24;UBERON:0004291!1.00e-08!24;UBERON:0009663!4.92e-08!7;UBERON:0002081!9.87e-08!2;UBERON:0002133!1.45e-07!2;UBERON:0001954!1.75e-07!2;UBERON:0003022!1.75e-07!2;UBERON:0002421!1.75e-07!2;UBERON:0002600!1.75e-07!2 | |ontology_enrichment_uberon=UBERON:0004151!5.99e-18!3;UBERON:0002079!3.50e-14!1;UBERON:0002084!5.15e-14!1;UBERON:0002082!5.15e-14!1;UBERON:0004706!5.15e-14!1;UBERON:0001874!6.65e-14!1;UBERON:0002135!7.55e-14!1;UBERON:0001882!1.25e-13!1;UBERON:0005403!1.25e-13!1;UBERON:0002372!2.07e-13!1;UBERON:0001961!2.07e-13!1;UBERON:0001744!2.07e-13!1;UBERON:0001735!2.07e-13!1;UBERON:0000369!2.21e-13!4;UBERON:0002435!2.21e-13!4;UBERON:0000204!2.21e-13!4;UBERON:0010082!2.21e-13!4;UBERON:0007023!1.11e-11!115;UBERON:0007100!1.13e-11!27;UBERON:0000349!8.29e-11!5;UBERON:0000948!1.00e-08!24;UBERON:0005498!1.00e-08!24;UBERON:0004140!1.00e-08!24;UBERON:0009881!1.00e-08!24;UBERON:0004141!1.00e-08!24;UBERON:0003084!1.00e-08!24;UBERON:0007005!1.00e-08!24;UBERON:0004139!1.00e-08!24;UBERON:0004291!1.00e-08!24;UBERON:0009663!4.92e-08!7;UBERON:0002081!9.87e-08!2;UBERON:0002133!1.45e-07!2;UBERON:0001954!1.75e-07!2;UBERON:0003022!1.75e-07!2;UBERON:0002421!1.75e-07!2;UBERON:0002600!1.75e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;2.39e-66;1!UBERON:0002081;5.04e-34;2!UBERON:0004151;3.27e-23;3!UBERON:0000948;3.77e-13;22!UBERON:0007100;1.03e-11;25 | |ontology_enrichment_uberon_v019=UBERON:0002079;2.39e-66;1!UBERON:0002081;5.04e-34;2!UBERON:0004151;3.27e-23;3!UBERON:0000948;3.77e-13;22!UBERON:0007100;1.03e-11;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.39e-66,1;UBERON:0002081,5.04e-34,2;UBERON:0010227,5.04e-34,2;UBERON:0004151,3.27e-23,3;UBERON:0000948,3.75e-12,24;UBERON:0005498,3.75e-12,24;UBERON:0004140,3.75e-12,24;UBERON:0009881,3.75e-12,24;UBERON:0004141,3.75e-12,24;UBERON:0003084,3.75e-12,24;UBERON:0007005,3.75e-12,24;UBERON:0004139,3.75e-12,24;UBERON:0004291,3.75e-12,24;UBERON:0007100,6.25e-11,27 | |||
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|short_description=p6@TESC | |short_description=p6@TESC | ||
}} | }} |
Latest revision as of 16:16, 16 September 2015
Short description: | p6@TESC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TESC_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -8bp_to_ENST00000535198_5end |
EntrezGene: | TESC |
HGNC: | 26065 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 4.66e-66 | 1 |
plasma cell | 4.66e-66 | 1 |
plasmablast | 4.66e-66 | 1 |
mature B cell | 7.05e-34 | 2 |
pre-B-II cell | 7.05e-34 | 2 |
transitional stage B cell | 7.05e-34 | 2 |
small pre-B-II cell | 7.05e-34 | 2 |
immature B cell | 7.05e-34 | 2 |
precursor B cell | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.39e-66 | 1 |
cardiac atrium | 5.04e-34 | 2 |
future cardiac atrium | 5.04e-34 | 2 |
cardiac chamber | 3.27e-23 | 3 |
heart | 3.75e-12 | 24 |
primitive heart tube | 3.75e-12 | 24 |
primary heart field | 3.75e-12 | 24 |
anterior lateral plate mesoderm | 3.75e-12 | 24 |
heart tube | 3.75e-12 | 24 |
heart primordium | 3.75e-12 | 24 |
cardiac mesoderm | 3.75e-12 | 24 |
cardiogenic plate | 3.75e-12 | 24 |
heart rudiment | 3.75e-12 | 24 |
primary circulatory organ | 6.25e-11 | 27 |