FFCP PHASE1:Hg19::chr12:104674543..104674573,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000549807_5end | |association_with_transcript=-43bp_to_ENST00000549807_5end | ||
|cluster_id=chr12:104674543..104674573,- | |||
|coexpression_cluster_id=C1655 | |coexpression_cluster_id=C1655 | ||
|description=CAGE_peak_2_at_ENST00000549807_5end | |description=CAGE_peak_2_at_ENST00000549807_5end | ||
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|ontology_enrichment_celltype=CL:0000222!1.11e-21!119;CL:0000055!1.52e-17!180;CL:0000548!4.77e-15!679;CL:0000004!4.77e-15!679;CL:0000255!4.77e-15!679;CL:0000012!1.19e-14!682;CL:0000077!7.46e-14!19;CL:0000076!1.20e-13!62;CL:0000192!2.27e-11!42;CL:0000514!2.27e-11!42;CL:0000213!2.62e-11!57;CL:0000215!2.62e-11!57;CL:0000057!3.47e-11!75;CL:0000220!3.61e-11!246;CL:0002321!7.65e-11!248;CL:0000680!8.63e-11!57;CL:0000056!8.63e-11!57;CL:0000355!8.63e-11!57;CL:0000187!1.11e-10!54;CL:0000003!9.38e-10!722;CL:0000183!1.42e-09!59;CL:0000359!1.55e-09!32;CL:0000144!1.02e-08!625;CL:0000393!1.72e-08!60;CL:0000211!1.72e-08!60;CL:0002620!6.99e-07!23 | |ontology_enrichment_celltype=CL:0000222!1.11e-21!119;CL:0000055!1.52e-17!180;CL:0000548!4.77e-15!679;CL:0000004!4.77e-15!679;CL:0000255!4.77e-15!679;CL:0000012!1.19e-14!682;CL:0000077!7.46e-14!19;CL:0000076!1.20e-13!62;CL:0000192!2.27e-11!42;CL:0000514!2.27e-11!42;CL:0000213!2.62e-11!57;CL:0000215!2.62e-11!57;CL:0000057!3.47e-11!75;CL:0000220!3.61e-11!246;CL:0002321!7.65e-11!248;CL:0000680!8.63e-11!57;CL:0000056!8.63e-11!57;CL:0000355!8.63e-11!57;CL:0000187!1.11e-10!54;CL:0000003!9.38e-10!722;CL:0000183!1.42e-09!59;CL:0000359!1.55e-09!32;CL:0000144!1.02e-08!625;CL:0000393!1.72e-08!60;CL:0000211!1.72e-08!60;CL:0002620!6.99e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.66e-26;19!CL:1000306;2.75e-10;4!CL:0002547;2.75e-10;4!CL:0002620;2.29e-07;23 | |ontology_enrichment_celltype_v019=CL:0000077;2.66e-26;19!CL:1000306;2.75e-10;4!CL:0002547;2.75e-10;4!CL:0002620;2.29e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.68e-26,19;CL:0000222,8.37e-13,121;CL:0000076,1.01e-11,63;CL:0000213,1.62e-11,58;CL:0000215,1.62e-11,58;CL:1000306,2.55e-10,4;CL:0002547,2.55e-10,4;CL:0002620,3.37e-07,23;CL:0000057,7.75e-07,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.05e-16!79;UBERON:0007798!3.05e-16!79;UBERON:0004872!2.27e-14!84;UBERON:0001981!2.92e-14!60;UBERON:0007500!2.92e-14!60;UBERON:0004537!2.92e-14!60;UBERON:0006965!2.92e-14!60;UBERON:0000055!6.26e-14!69;UBERON:0004535!2.42e-13!110;UBERON:0001637!4.34e-13!42;UBERON:0003509!4.34e-13!42;UBERON:0004572!4.34e-13!42;UBERON:0000490!8.27e-13!138;UBERON:0001009!1.84e-12!113;UBERON:0003914!8.62e-12!118;UBERON:0004573!8.98e-12!33;UBERON:0004571!8.98e-12!33;UBERON:0000947!2.25e-10!21;UBERON:0010191!2.25e-10!21;UBERON:0001134!2.63e-09!61;UBERON:0002036!2.63e-09!61;UBERON:0003082!2.63e-09!61;UBERON:0002385!1.19e-08!63;UBERON:0001015!1.19e-08!63;UBERON:0000383!1.19e-08!63;UBERON:0000487!1.44e-08!22;UBERON:0004290!1.41e-07!70;UBERON:0000477!2.15e-07!286;UBERON:0006914!7.32e-07!25;UBERON:0000914!9.29e-07!83;UBERON:0002329!9.29e-07!83;UBERON:0003077!9.29e-07!83;UBERON:0003059!9.29e-07!83;UBERON:0007282!9.29e-07!83;UBERON:0009618!9.29e-07!83;UBERON:0007285!9.29e-07!83 | |ontology_enrichment_uberon=UBERON:0002049!3.05e-16!79;UBERON:0007798!3.05e-16!79;UBERON:0004872!2.27e-14!84;UBERON:0001981!2.92e-14!60;UBERON:0007500!2.92e-14!60;UBERON:0004537!2.92e-14!60;UBERON:0006965!2.92e-14!60;UBERON:0000055!6.26e-14!69;UBERON:0004535!2.42e-13!110;UBERON:0001637!4.34e-13!42;UBERON:0003509!4.34e-13!42;UBERON:0004572!4.34e-13!42;UBERON:0000490!8.27e-13!138;UBERON:0001009!1.84e-12!113;UBERON:0003914!8.62e-12!118;UBERON:0004573!8.98e-12!33;UBERON:0004571!8.98e-12!33;UBERON:0000947!2.25e-10!21;UBERON:0010191!2.25e-10!21;UBERON:0001134!2.63e-09!61;UBERON:0002036!2.63e-09!61;UBERON:0003082!2.63e-09!61;UBERON:0002385!1.19e-08!63;UBERON:0001015!1.19e-08!63;UBERON:0000383!1.19e-08!63;UBERON:0000487!1.44e-08!22;UBERON:0004290!1.41e-07!70;UBERON:0000477!2.15e-07!286;UBERON:0006914!7.32e-07!25;UBERON:0000914!9.29e-07!83;UBERON:0002329!9.29e-07!83;UBERON:0003077!9.29e-07!83;UBERON:0003059!9.29e-07!83;UBERON:0007282!9.29e-07!83;UBERON:0009618!9.29e-07!83;UBERON:0007285!9.29e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.75e-10;4!UBERON:0000415;2.75e-10;4!UBERON:0007240;2.75e-10;4!UBERON:0005742;2.75e-10;4!UBERON:0005734;2.75e-10;4!UBERON:0004664;2.75e-10;4!UBERON:0004663;2.75e-10;4!UBERON:0000947;3.51e-07;21!UBERON:0010191;3.51e-07;21 | |ontology_enrichment_uberon_v019=UBERON:0004797;2.75e-10;4!UBERON:0000415;2.75e-10;4!UBERON:0007240;2.75e-10;4!UBERON:0005742;2.75e-10;4!UBERON:0005734;2.75e-10;4!UBERON:0004664;2.75e-10;4!UBERON:0004663;2.75e-10;4!UBERON:0000947;3.51e-07;21!UBERON:0010191;3.51e-07;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,2.55e-10,4;UBERON:0007240,2.55e-10,4;UBERON:0005742,2.55e-10,4;UBERON:0005734,2.55e-10,4;UBERON:0004664,2.55e-10,4;UBERON:0004663,2.55e-10,4;UBERON:0000947,2.14e-07,21;UBERON:0010191,2.14e-07,21;UBERON:0004573,2.66e-07,33;UBERON:0004571,2.66e-07,33 | |||
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| ||
|short_description=p2@ENST00000549807 | |short_description=p2@ENST00000549807 | ||
}} | }} |
Latest revision as of 04:17, 24 July 2015
Short description: | p2@ENST00000549807 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000549807_5end |
Coexpression cluster: | C1655_large_mesothelioma_Fibroblast_giant_oral_mesenchymal_mucinous |
Association with transcript: | -43bp_to_ENST00000549807_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.68e-26 | 19 |
mesodermal cell | 8.37e-13 | 121 |
squamous epithelial cell | 1.01e-11 | 63 |
lining cell | 1.62e-11 | 58 |
barrier cell | 1.62e-11 | 58 |
fibroblast of tunica adventitia of artery | 2.55e-10 | 4 |
fibroblast of the aortic adventitia | 2.55e-10 | 4 |
skin fibroblast | 3.37e-07 | 23 |
fibroblast | 7.75e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
artery wall | 2.55e-10 | 4 |
tunica adventitia of artery | 2.55e-10 | 4 |
adventitia | 2.55e-10 | 4 |
tunica adventitia of blood vessel | 2.55e-10 | 4 |
aorta tunica adventitia | 2.55e-10 | 4 |
aorta wall | 2.55e-10 | 4 |
aorta | 2.14e-07 | 21 |
aortic system | 2.14e-07 | 21 |
systemic artery | 2.66e-07 | 33 |
systemic arterial system | 2.66e-07 | 33 |