FFCP PHASE1:Hg19::chr14:50065524..50065533,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122769 | |EntrezGene=122769 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19742 | |HGNC=19742 | ||
|TSSclassifier=strong | |||
|UniProt=G3V5H2 | |UniProt=G3V5H2 | ||
|association_with_transcript=31bp_to_ENST00000554869_5end | |association_with_transcript=31bp_to_ENST00000554869_5end | ||
|cluster_id=chr14:50065524..50065533,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_12_at_LRR1_5end | |description=CAGE_peak_12_at_LRR1_5end | ||
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|ontology_enrichment_celltype=CL:0000784!3.49e-10!3;CL:0000342!4.40e-08!1;CL:0002565!4.40e-08!1;CL:0002557!8.69e-08!1 | |ontology_enrichment_celltype=CL:0000784!3.49e-10!3;CL:0000342!4.40e-08!1;CL:0002565!4.40e-08!1;CL:0002557!8.69e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000307;4.09e-23;3!CL:0002202;1.21e-08;9!CL:0002632;1.21e-08;9 | |ontology_enrichment_celltype_v019=CL:0000307;4.09e-23;3!CL:0002202;1.21e-08;9!CL:0002632;1.21e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.09e-23,3;CL:0000069,4.09e-23,3;CL:0000307,4.09e-23,3;CL:0000377,4.09e-23,3;CL:0002202,1.21e-08,9;CL:0002632,1.21e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10!CL:0000377;4.09e-23;3 | |ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10!CL:0000377;4.09e-23;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002506!4.40e-08!1;UBERON:0001769!4.40e-08!1;UBERON:0002022!1.21e-07!1;UBERON:0000488!1.75e-07!4 | |ontology_enrichment_uberon=UBERON:0002506!4.40e-08!1;UBERON:0001769!4.40e-08!1;UBERON:0002022!1.21e-07!1;UBERON:0000488!1.75e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22!UBERON:0003126;9.89e-11;7!UBERON:0001005;9.89e-11;7 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22!UBERON:0003126;9.89e-11;7!UBERON:0001005;9.89e-11;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0003126,9.89e-11,7;UBERON:0001005,9.89e-11,7;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p12@LRR1 | |short_description=p12@LRR1 | ||
}} | }} |
Latest revision as of 02:02, 20 September 2015
Short description: | p12@LRR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_LRR1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 31bp_to_ENST00000554869_5end |
EntrezGene: | LRR1 |
HGNC: | 19742 |
UniProt: | G3V5H2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.09e-23 | 3 |
branched duct epithelial cell | 4.09e-23 | 3 |
tracheal epithelial cell | 4.09e-23 | 3 |
tracheoblast | 4.09e-23 | 3 |
epithelial cell of tracheobronchial tree | 1.21e-08 | 9 |
epithelial cell of lower respiratory tract | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
trachea | 9.89e-11 | 7 |
respiratory airway | 9.89e-11 | 7 |
body cavity | 7.30e-07 | 46 |