FFCP PHASE1:Hg19::chr7:77428227..77428242,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57157 | |EntrezGene=57157 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13411 | |HGNC=13411 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000275575_5end | |association_with_transcript=9bp_to_ENST00000275575_5end | ||
|cluster_id=chr7:77428227..77428242,+ | |||
|description=CAGE_peak_3_at_PHTF2_5end | |description=CAGE_peak_3_at_PHTF2_5end | ||
|id=chr7:77428227..77428242,+ | |id=chr7:77428227..77428242,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.37e-11!94;UBERON:0001016!9.37e-11!94;UBERON:0005743!1.34e-09!86;UBERON:0001017!6.00e-09!82;UBERON:0000955!6.40e-08!69;UBERON:0006238!6.40e-08!69;UBERON:0002780!8.85e-08!41;UBERON:0001890!8.85e-08!41;UBERON:0006240!8.85e-08!41;UBERON:0001893!9.81e-08!34;UBERON:0002791!2.50e-07!33;UBERON:0003080!3.39e-07!42;UBERON:0002020!3.58e-07!34;UBERON:0003528!3.58e-07!34;UBERON:0000924!3.64e-07!173;UBERON:0006601!3.64e-07!173;UBERON:0001049!4.33e-07!57;UBERON:0005068!4.33e-07!57;UBERON:0006241!4.33e-07!57;UBERON:0007135!4.33e-07!57;UBERON:0001869!5.95e-07!32 | |ontology_enrichment_uberon=UBERON:0000073!9.37e-11!94;UBERON:0001016!9.37e-11!94;UBERON:0005743!1.34e-09!86;UBERON:0001017!6.00e-09!82;UBERON:0000955!6.40e-08!69;UBERON:0006238!6.40e-08!69;UBERON:0002780!8.85e-08!41;UBERON:0001890!8.85e-08!41;UBERON:0006240!8.85e-08!41;UBERON:0001893!9.81e-08!34;UBERON:0002791!2.50e-07!33;UBERON:0003080!3.39e-07!42;UBERON:0002020!3.58e-07!34;UBERON:0003528!3.58e-07!34;UBERON:0000924!3.64e-07!173;UBERON:0006601!3.64e-07!173;UBERON:0001049!4.33e-07!57;UBERON:0005068!4.33e-07!57;UBERON:0006241!4.33e-07!57;UBERON:0007135!4.33e-07!57;UBERON:0001869!5.95e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.81e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0001893;1.81e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.18e-10,89;UBERON:0001017,4.34e-10,81;UBERON:0001893,1.25e-09,34;UBERON:0001049,3.06e-09,56;UBERON:0005068,3.06e-09,56;UBERON:0006241,3.06e-09,56;UBERON:0007135,3.06e-09,56;UBERON:0000955,3.70e-09,68;UBERON:0006238,3.70e-09,68;UBERON:0002780,7.12e-09,41;UBERON:0001890,7.12e-09,41;UBERON:0003080,7.12e-09,41;UBERON:0006240,7.12e-09,41;UBERON:0001869,1.59e-08,32;UBERON:0002791,1.81e-08,32;UBERON:0000073,2.45e-08,53;UBERON:0002616,2.45e-08,53;UBERON:0003528,2.48e-08,34;UBERON:0002020,2.48e-08,34;UBERON:0002619,6.85e-08,22;UBERON:0001950,7.81e-08,20;UBERON:0002346,2.80e-07,86;UBERON:0003056,6.71e-07,61;UBERON:0003075,7.56e-07,82;UBERON:0007284,7.56e-07,82 | |||
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| ||
|short_description=p3@PHTF2 | |short_description=p3@PHTF2 | ||
}} | }} |
Latest revision as of 15:09, 19 September 2015
Short description: | p3@PHTF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PHTF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000275575_5end |
EntrezGene: | PHTF2 |
HGNC: | 13411 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.18e-10 | 89 |
central nervous system | 4.34e-10 | 81 |
telencephalon | 1.25e-09 | 34 |
neural tube | 3.06e-09 | 56 |
neural rod | 3.06e-09 | 56 |
future spinal cord | 3.06e-09 | 56 |
neural keel | 3.06e-09 | 56 |
brain | 3.70e-09 | 68 |
future brain | 3.70e-09 | 68 |
regional part of forebrain | 7.12e-09 | 41 |
forebrain | 7.12e-09 | 41 |
anterior neural tube | 7.12e-09 | 41 |
future forebrain | 7.12e-09 | 41 |
cerebral hemisphere | 1.59e-08 | 32 |
regional part of telencephalon | 1.81e-08 | 32 |
regional part of nervous system | 2.45e-08 | 53 |
regional part of brain | 2.45e-08 | 53 |
brain grey matter | 2.48e-08 | 34 |
gray matter | 2.48e-08 | 34 |
regional part of cerebral cortex | 6.85e-08 | 22 |
neocortex | 7.81e-08 | 20 |
neurectoderm | 2.80e-07 | 86 |
pre-chordal neural plate | 6.71e-07 | 61 |
neural plate | 7.56e-07 | 82 |
presumptive neural plate | 7.56e-07 | 82 |