FFCP PHASE1:Hg19::chr13:75884448..75884459,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:75884448..75884459,- | |||
|coexpression_cluster_id=C80 | |coexpression_cluster_id=C80 | ||
|description=CAGE_peak_at_chr13:75884448..75884459,- | |description=CAGE_peak_at_chr13:75884448..75884459,- | ||
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|ontology_enrichment_celltype=CL:0000990!2.76e-31!8;CL:0000451!2.36e-25!10;CL:0000453!1.24e-23!5;CL:0000840!1.53e-18!5;CL:0001029!1.53e-18!5;CL:0000738!4.77e-11!140;CL:0001014!1.46e-10!2;CL:0001016!1.46e-10!2;CL:0002032!1.42e-09!165;CL:0000837!1.42e-09!165;CL:0002031!2.98e-09!124;CL:0000037!5.74e-09!172;CL:0000566!5.74e-09!172;CL:0000988!3.47e-08!182;CL:0002087!1.58e-07!119 | |ontology_enrichment_celltype=CL:0000990!2.76e-31!8;CL:0000451!2.36e-25!10;CL:0000453!1.24e-23!5;CL:0000840!1.53e-18!5;CL:0001029!1.53e-18!5;CL:0000738!4.77e-11!140;CL:0001014!1.46e-10!2;CL:0001016!1.46e-10!2;CL:0002032!1.42e-09!165;CL:0000837!1.42e-09!165;CL:0002031!2.98e-09!124;CL:0000037!5.74e-09!172;CL:0000566!5.74e-09!172;CL:0000988!3.47e-08!182;CL:0002087!1.58e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.65e-140;5!CL:0000990;1.98e-78;8!CL:0000451;2.63e-64;10!CL:0001014;1.13e-57;2!CL:0001016;1.13e-57;2!CL:0000840;4.86e-20;5 | |ontology_enrichment_celltype_v019=CL:0000453;1.65e-140;5!CL:0000990;1.98e-78;8!CL:0000451;2.63e-64;10!CL:0001014;1.13e-57;2!CL:0001016;1.13e-57;2!CL:0000840;4.86e-20;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.65e-140,5;CL:0000990,1.98e-78,8;CL:0000451,2.63e-64,10;CL:0001014,1.13e-57,2;CL:0001016,1.13e-57,2;CL:0000840,4.86e-20,5;CL:0001029,4.86e-20,5;CL:0000763,7.91e-07,108;CL:0000049,7.91e-07,108 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.68e-10!7;UBERON:0002193!1.88e-08!112;UBERON:0002390!1.97e-08!102;UBERON:0003061!1.97e-08!102;UBERON:0002405!4.24e-08!115;UBERON:0002106!9.83e-07!3;UBERON:0004854!9.83e-07!3;UBERON:0009034!9.83e-07!3;UBERON:0002095!9.83e-07!3;UBERON:0004782!9.83e-07!3;UBERON:0003281!9.83e-07!3;UBERON:0009664!9.83e-07!3;UBERON:0002296!9.83e-07!3;UBERON:0005602!9.83e-07!3;UBERON:0001179!9.83e-07!3;UBERON:0006293!9.83e-07!3 | |ontology_enrichment_uberon=UBERON:0004177!2.68e-10!7;UBERON:0002193!1.88e-08!112;UBERON:0002390!1.97e-08!102;UBERON:0003061!1.97e-08!102;UBERON:0002405!4.24e-08!115;UBERON:0002106!9.83e-07!3;UBERON:0004854!9.83e-07!3;UBERON:0009034!9.83e-07!3;UBERON:0002095!9.83e-07!3;UBERON:0004782!9.83e-07!3;UBERON:0003281!9.83e-07!3;UBERON:0009664!9.83e-07!3;UBERON:0002296!9.83e-07!3;UBERON:0005602!9.83e-07!3;UBERON:0001179!9.83e-07!3;UBERON:0006293!9.83e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;4.20e-29;1!UBERON:0006518;4.20e-29;1!UBERON:0008949;4.20e-29;1!UBERON:0000101;4.20e-29;1!UBERON:0002167;4.20e-29;1!UBERON:0002106;1.09e-10;3!UBERON:0004177;6.39e-07;5!UBERON:0005057;6.39e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002171;4.20e-29;1!UBERON:0006518;4.20e-29;1!UBERON:0008949;4.20e-29;1!UBERON:0000101;4.20e-29;1!UBERON:0002167;4.20e-29;1!UBERON:0002106;1.09e-10;3!UBERON:0004177;6.39e-07;5!UBERON:0005057;6.39e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,4.20e-29,1;UBERON:0006518,4.20e-29,1;UBERON:0008949,4.20e-29,1;UBERON:0000101,4.20e-29,1;UBERON:0002167,4.20e-29,1;UBERON:0002106,1.09e-10,3;UBERON:0004854,1.09e-10,3;UBERON:0009034,1.09e-10,3;UBERON:0002095,1.09e-10,3;UBERON:0004782,1.09e-10,3;UBERON:0003281,1.09e-10,3;UBERON:0009664,1.09e-10,3;UBERON:0002296,1.09e-10,3;UBERON:0005602,1.09e-10,3;UBERON:0001179,1.09e-10,3;UBERON:0006293,1.09e-10,3 | |||
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|short_description=p@chr13:75884448..75884459,- | |short_description=p@chr13:75884448..75884459,- | ||
}} | }} |
Latest revision as of 17:05, 24 July 2015
Short description: | p@chr13:75884448..75884459, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:75884448..75884459, - |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.65e-140 | 5 |
conventional dendritic cell | 1.98e-78 | 8 |
dendritic cell | 2.63e-64 | 10 |
CD1a-positive Langerhans cell | 1.13e-57 | 2 |
immature CD1a-positive Langerhans cell | 1.13e-57 | 2 |
immature conventional dendritic cell | 4.86e-20 | 5 |
common dendritic progenitor | 4.86e-20 | 5 |
myeloid cell | 7.91e-07 | 108 |
common myeloid progenitor | 7.91e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 4.20e-29 | 1 |
right lung lobe | 4.20e-29 | 1 |
lower lobe of lung | 4.20e-29 | 1 |
lobe of lung | 4.20e-29 | 1 |
right lung | 4.20e-29 | 1 |
spleen | 1.09e-10 | 3 |
gastrointestinal system mesentery | 1.09e-10 | 3 |
stomach region | 1.09e-10 | 3 |
mesentery | 1.09e-10 | 3 |
gastrointestinal system serosa | 1.09e-10 | 3 |
mesentery of stomach | 1.09e-10 | 3 |
gut mesentery | 1.09e-10 | 3 |
dorsal mesentery | 1.09e-10 | 3 |
dorsal mesogastrium | 1.09e-10 | 3 |
peritoneal cavity | 1.09e-10 | 3 |
spleen primordium | 1.09e-10 | 3 |