FFCP PHASE1:Hg19::chr21:47424253..47424260,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:47424253..47424260,+
|short_description=p@chr21:47424253..47424260,+
|description=CAGE_peak_at_chr21:47424253..47424260,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:47424253..47424260,+ | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_at_chr21:47424253..47424260,+ | |||
|id=chr21:47424253..47424260,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.75e-26!180;CL:0000057!1.31e-23!75;CL:0002620!3.73e-13!23;CL:0000048!1.74e-11!430;CL:0000723!8.96e-11!436;CL:0000034!1.66e-10!444;CL:0002570!5.22e-09!8;CL:0000680!1.34e-08!57;CL:0000056!1.34e-08!57;CL:0000355!1.34e-08!57;CL:0000187!3.00e-08!54;CL:0000183!5.27e-08!59;CL:0000393!8.43e-08!60;CL:0000211!8.43e-08!60;CL:0002320!1.77e-07!365;CL:0002494!3.50e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002570;6.31e-19;8!CL:0000499;1.32e-11;28!CL:0000135;3.93e-11;3!CL:0000388;3.93e-11;3!CL:0002583;6.73e-08;2!CL:0002195;2.42e-07;2!CL:0002571;2.42e-07;2!CL:0002620;3.58e-07;23!CL:1000487;5.96e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,6.55e-19,8;CL:0000057,9.44e-13,76;CL:0000499,9.81e-12,28;CL:0000135,4.33e-11,3;CL:0000388,4.33e-11,3;CL:0000048,4.49e-11,427;CL:0000723,9.66e-11,433;CL:0000034,2.60e-10,441;CL:0002320,8.00e-10,361;CL:0000134,3.19e-08,354;CL:0002583,5.66e-08,2;CL:0002620,3.93e-07,23;CL:0002195,5.48e-07,2;CL:0002571,5.48e-07,2;CL:1000487,7.90e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!7.57e-12!45;UBERON:0002416!7.57e-12!45;UBERON:0003102!4.68e-11!95;UBERON:0000914!3.31e-10!83;UBERON:0002329!3.31e-10!83;UBERON:0003077!3.31e-10!83;UBERON:0003059!3.31e-10!83;UBERON:0007282!3.31e-10!83;UBERON:0009618!3.31e-10!83;UBERON:0007285!3.31e-10!83;UBERON:0004290!3.71e-10!70;UBERON:0001013!1.67e-09!14;UBERON:0002385!6.59e-09!63;UBERON:0001015!6.59e-09!63;UBERON:0000383!6.59e-09!63;UBERON:0005256!1.57e-08!143;UBERON:0002097!2.06e-08!40;UBERON:0000486!2.31e-08!82;UBERON:0001134!3.32e-08!61;UBERON:0002036!3.32e-08!61;UBERON:0003082!3.32e-08!61;UBERON:0002384!9.76e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.23e-17;14!UBERON:0007846;3.93e-11;3!UBERON:0000043;3.93e-11;3!UBERON:0007845;3.93e-11;3!UBERON:0002072;5.39e-11;5!UBERON:0002199;1.35e-07;46!UBERON:0002416;1.35e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,4.00e-17,14;UBERON:0002072,4.23e-11,5;UBERON:0007846,4.33e-11,3;UBERON:0000043,4.33e-11,3;UBERON:0007845,4.33e-11,3;UBERON:0002199,4.21e-10,46;UBERON:0002416,4.21e-10,46;UBERON:0003102,1.33e-09,99;UBERON:0002384,2.99e-09,371;UBERON:0003104,2.79e-07,160;UBERON:0009142,2.79e-07,160 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.563817616383885,0,0,0,5.06599756336621,0.631719873426831,1.56711376919903,0,0,0,0,0.123766352960047,1.98838425436749,2.6893005858071,0,0,1.46379839637152,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.639312809217652,1.80719576192283,1.00267582127178,2.89693037921647,0,0.486634870302636,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.397227542439656,0.860509862246441,1.41867352879343,0.560677600142307,0,1.2333377420858,0.311211035399766,0.134710672069688,0.163461903113459,0.302714855289863,1.15235184896,0.234321431833797,2.49728061464256,0,1.94283284717341,0.469737994575059,0.161872944368132,0.280901613404497,0.61246251376468,0.491337269247072,0.826606249406124,0,1.7308685049499,0,0,0,0,0,0,1.83892677479412,0.751190294532984,0.340296549480063,0.717558542755448,1.2813443329114,1.05965950579781,1.50045548042201,0.92747276314595,1.54584324027377,0.37223371266318,1.68776332241266,0.389748020644795,1.00973509697646,0.0920498986422993,0.80823028409406,0.355009592516614,0.403008392910561,0.339121184620975,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,5.78916844373597,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.2933531432838,0.129271715757778,3.57656445851882,2.535908257668,0.797814349754612,0,0,0,0.266422179016099,1.00084595560703,1.08524321078289,0.823240336780769,1.62868092146868,2.13235169245527,0.791951872933429,0.301439377059586,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,1.50051156317903,0.813795071099207,1.87173775377726,1.60586089917446,0.315404830067869,0.819989904948992,0,0,0,0.664225598535437,0,1.65078867489357,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.128139149255701,0,0.804269605718038,0,2.92998418225046,4.26148140751505,0.739144404124282,2.07701771673448,2.44041794765914,0.120859449591622,0.200506470303285,0,0.459257792658427,2.36718518408732,3.2781103739856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0,0,0,1.6068392984416,2.12675580242668,0.462145851343933,0.307007349452259,0.413509717453592,0.429680979473094,0.725083469571143,0.511359764496605,1.78064071293475,0,0,0,0,0.464845549297286,0.94443704049192,0,0.308033580176089,0,0,0.18532421910392,0,0,0.316379424718726,0.38126038784765,0,0.42793898803392,0.318203247925937,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0.842516912477962,0,1.70599442741899,0,1.36499911407986,1.41405431953713,1.13008116620243,0,0,0,0,2.62357900818653,0.202910376962704,0,0,0,0.491245205065606,0,0,1.89996871767898,0.658589785919804,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.933118762985422,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0,0,0,0,0.461701551022782,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.0969890164884194,0,0.451961481561065,0.137041924646751,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.482259445395058,0.275078873194468,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.470531639396343,0,0,2.23882204330311,2.80455971816669,0.554805861502613,0.947015026375446,1.25783950876288,1.77962244319307,0.457680136793847,1.51230923763239,0.466311601748341,0.443565449968902,0,0.899606224327209,0.465788870628778,0.829412415681711,0.797525143673985,0,0.601030435988874,0.380805212168795,0,0.909243296012797,0.751873899297419,0.464033759878494,0.398095888698616,0,1.37358282073117,1.34699795506368,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,1.41070377476274,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0.1714880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| ||
|short_description=p@chr21:47424253..47424260,+ | |||
}} | }} |
Latest revision as of 18:44, 28 July 2015
Short description: | p@chr21:47424253..47424260, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47424253..47424260, + |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 6.55e-19 | 8 |
fibroblast | 9.44e-13 | 76 |
stromal cell | 9.81e-12 | 28 |
fibrocyte | 4.33e-11 | 3 |
tendon cell | 4.33e-11 | 3 |
multi fate stem cell | 4.49e-11 | 427 |
somatic stem cell | 9.66e-11 | 433 |
stem cell | 2.60e-10 | 441 |
connective tissue cell | 8.00e-10 | 361 |
mesenchymal cell | 3.19e-08 | 354 |
subcutaneous preadipocyte | 5.66e-08 | 2 |
skin fibroblast | 3.93e-07 | 23 |
hepatic stem cell | 5.48e-07 | 2 |
hepatic mesenchymal stem cell | 5.48e-07 | 2 |
smooth muscle cell of prostate | 7.90e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 4.00e-17 | 14 |
hypodermis | 4.23e-11 | 5 |
dense regular connective tissue | 4.33e-11 | 3 |
tendon | 4.33e-11 | 3 |
regular connective tissue | 4.33e-11 | 3 |
integument | 4.21e-10 | 46 |
integumental system | 4.21e-10 | 46 |
surface structure | 1.33e-09 | 99 |
connective tissue | 2.99e-09 | 371 |
mesenchyme | 2.79e-07 | 160 |
entire embryonic mesenchyme | 2.79e-07 | 160 |