FFCP PHASE1:Hg19::chr16:53133084..53133121,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80205 | |EntrezGene=80205 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25701 | |HGNC=25701 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NAR9 | |UniProt=Q8NAR9 | ||
|association_with_transcript=12bp_to_uc002egz.1_5end | |association_with_transcript=12bp_to_uc002egz.1_5end | ||
|cluster_id=chr16:53133084..53133121,+ | |||
|description=CAGE_peak_4_at_CHD9_5end | |description=CAGE_peak_4_at_CHD9_5end | ||
|id=chr16:53133084..53133121,+ | |id=chr16:53133084..53133121,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.30e-32!76;CL:0000557!4.27e-30!71;CL:0000738!7.01e-30!140;CL:0002009!1.78e-28!65;CL:0002194!2.37e-27!63;CL:0000576!2.37e-27!63;CL:0000040!2.37e-27!63;CL:0000559!2.37e-27!63;CL:0000839!2.78e-27!70;CL:0002057!2.75e-26!42;CL:0000037!4.68e-24!172;CL:0000566!4.68e-24!172;CL:0000763!1.43e-23!112;CL:0000049!1.43e-23!112;CL:0000988!1.51e-22!182;CL:0002031!2.92e-22!124;CL:0002087!4.02e-22!119;CL:0000860!5.31e-22!45;CL:0002032!1.69e-21!165;CL:0000837!1.69e-21!165;CL:0000048!7.80e-19!430;CL:0000134!3.24e-18!358;CL:0000723!1.08e-17!436;CL:0002320!3.93e-17!365;CL:0000034!5.55e-17!444;CL:0000219!1.64e-13!390 | |ontology_enrichment_celltype=CL:0000766!1.30e-32!76;CL:0000557!4.27e-30!71;CL:0000738!7.01e-30!140;CL:0002009!1.78e-28!65;CL:0002194!2.37e-27!63;CL:0000576!2.37e-27!63;CL:0000040!2.37e-27!63;CL:0000559!2.37e-27!63;CL:0000839!2.78e-27!70;CL:0002057!2.75e-26!42;CL:0000037!4.68e-24!172;CL:0000566!4.68e-24!172;CL:0000763!1.43e-23!112;CL:0000049!1.43e-23!112;CL:0000988!1.51e-22!182;CL:0002031!2.92e-22!124;CL:0002087!4.02e-22!119;CL:0000860!5.31e-22!45;CL:0002032!1.69e-21!165;CL:0000837!1.69e-21!165;CL:0000048!7.80e-19!430;CL:0000134!3.24e-18!358;CL:0000723!1.08e-17!436;CL:0002320!3.93e-17!365;CL:0000034!5.55e-17!444;CL:0000219!1.64e-13!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.65e-21;33!CL:0002057;1.65e-21;33!CL:0000473;2.37e-21;39!CL:0000234;2.37e-21;39!CL:0000576;7.15e-19;48!CL:0000766;1.05e-16;69!CL:0000738;8.38e-09;136!CL:0000763;3.94e-08;100!CL:0002087;2.51e-07;104 | |ontology_enrichment_celltype_v019=CL:0000860;1.65e-21;33!CL:0002057;1.65e-21;33!CL:0000473;2.37e-21;39!CL:0000234;2.37e-21;39!CL:0000576;7.15e-19;48!CL:0000766;1.05e-16;69!CL:0000738;8.38e-09;136!CL:0000763;3.94e-08;100!CL:0002087;2.51e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.05e-40,72;CL:0000557,3.40e-37,67;CL:0002009,1.42e-35,61;CL:0002194,2.49e-34,59;CL:0000576,2.49e-34,59;CL:0000040,2.49e-34,59;CL:0000559,2.49e-34,59;CL:0000738,4.92e-34,136;CL:0000839,1.21e-33,66;CL:0000473,2.62e-32,48;CL:0000234,2.62e-32,48;CL:0000860,3.03e-28,42;CL:0002057,3.03e-28,42;CL:0000763,9.45e-28,108;CL:0000049,9.45e-28,108;CL:0000037,8.61e-27,168;CL:0000988,7.81e-26,177;CL:0002087,1.76e-25,115;CL:0002031,1.99e-25,120;CL:0002032,5.55e-24,161;CL:0000837,5.55e-24,161;CL:0000134,1.99e-17,354;CL:0000048,2.56e-17,427;CL:0002320,1.64e-16,361;CL:0000723,4.59e-16,433;CL:0000034,1.05e-15,441;CL:0000219,3.89e-13,386 | |||
|ontology_enrichment_development_v019=CL:0002057;9.57e-21;42!CL:0000049;2.09e-08;108 | |ontology_enrichment_development_v019=CL:0002057;9.57e-21;42!CL:0000049;2.09e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.53e-30!102;UBERON:0003061!6.53e-30!102;UBERON:0002193!7.09e-29!112;UBERON:0002371!3.47e-27!80;UBERON:0001474!3.01e-25!86;UBERON:0004765!2.41e-21!101;UBERON:0001434!2.41e-21!101;UBERON:0002204!8.03e-19!167;UBERON:0002405!1.64e-18!115;UBERON:0002384!3.78e-17!375;UBERON:0003081!8.33e-15!216;UBERON:0000479!3.10e-09!787 | |ontology_enrichment_uberon=UBERON:0002390!6.53e-30!102;UBERON:0003061!6.53e-30!102;UBERON:0002193!7.09e-29!112;UBERON:0002371!3.47e-27!80;UBERON:0001474!3.01e-25!86;UBERON:0004765!2.41e-21!101;UBERON:0001434!2.41e-21!101;UBERON:0002204!8.03e-19!167;UBERON:0002405!1.64e-18!115;UBERON:0002384!3.78e-17!375;UBERON:0003081!8.33e-15!216;UBERON:0000479!3.10e-09!787 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.97e-36,98;UBERON:0003061,1.97e-36,98;UBERON:0002193,6.11e-34,108;UBERON:0002371,1.13e-33,76;UBERON:0001474,9.56e-32,82;UBERON:0002405,1.07e-30,93;UBERON:0004765,1.64e-30,90;UBERON:0001434,8.04e-25,100;UBERON:0002204,6.81e-21,167;UBERON:0003081,9.34e-21,203;UBERON:0000926,1.99e-20,315;UBERON:0004120,1.99e-20,315;UBERON:0006603,1.99e-20,315;UBERON:0002384,2.80e-16,371;UBERON:0000479,3.71e-09,773 | |||
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| ||
|short_description=p4@CHD9 | |short_description=p4@CHD9 | ||
}} | }} |
Latest revision as of 22:23, 16 September 2015
Short description: | p4@CHD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CHD9_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_uc002egz.1_5end |
EntrezGene: | CHD9 |
HGNC: | 25701 |
UniProt: | Q8NAR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.05e-40 | 72 |
granulocyte monocyte progenitor cell | 3.40e-37 | 67 |
macrophage dendritic cell progenitor | 1.42e-35 | 61 |
monopoietic cell | 2.49e-34 | 59 |
monocyte | 2.49e-34 | 59 |
monoblast | 2.49e-34 | 59 |
promonocyte | 2.49e-34 | 59 |
leukocyte | 4.92e-34 | 136 |
myeloid lineage restricted progenitor cell | 1.21e-33 | 66 |
defensive cell | 2.62e-32 | 48 |
phagocyte | 2.62e-32 | 48 |
classical monocyte | 3.03e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.03e-28 | 42 |
myeloid cell | 9.45e-28 | 108 |
common myeloid progenitor | 9.45e-28 | 108 |
hematopoietic stem cell | 8.61e-27 | 168 |
hematopoietic cell | 7.81e-26 | 177 |
nongranular leukocyte | 1.76e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 1.99e-25 | 120 |
hematopoietic oligopotent progenitor cell | 5.55e-24 | 161 |
hematopoietic multipotent progenitor cell | 5.55e-24 | 161 |
mesenchymal cell | 1.99e-17 | 354 |
multi fate stem cell | 2.56e-17 | 427 |
connective tissue cell | 1.64e-16 | 361 |
somatic stem cell | 4.59e-16 | 433 |
stem cell | 1.05e-15 | 441 |
motile cell | 3.89e-13 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.97e-36 | 98 |
blood island | 1.97e-36 | 98 |
hemolymphoid system | 6.11e-34 | 108 |
bone marrow | 1.13e-33 | 76 |
bone element | 9.56e-32 | 82 |
immune system | 1.07e-30 | 93 |
skeletal element | 1.64e-30 | 90 |
skeletal system | 8.04e-25 | 100 |
musculoskeletal system | 6.81e-21 | 167 |
lateral plate mesoderm | 9.34e-21 | 203 |
mesoderm | 1.99e-20 | 315 |
mesoderm-derived structure | 1.99e-20 | 315 |
presumptive mesoderm | 1.99e-20 | 315 |
connective tissue | 2.80e-16 | 371 |
tissue | 3.71e-09 | 773 |