FFCP PHASE1:Hg19::chr7:31726791..31726798,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10842 | |EntrezGene=10842 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16973 | |HGNC=16973 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003tcl.2,uc011kaf.1_5end | |association_with_transcript=0bp_to_uc003tcl.2,uc011kaf.1_5end | ||
|cluster_id=chr7:31726791..31726798,+ | |||
|coexpression_cluster_id=C85 | |coexpression_cluster_id=C85 | ||
|description=CAGE_peak_2_at_PPP1R17_5end | |description=CAGE_peak_2_at_PPP1R17_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002393!9.16e-17!9;CL:0002397!9.16e-17!9;CL:0000875!2.22e-09!3;CL:0002396!2.22e-09!3 | |ontology_enrichment_celltype=CL:0002393!9.16e-17!9;CL:0002397!9.16e-17!9;CL:0000875!2.22e-09!3;CL:0002396!2.22e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000875;3.66e-23;3!CL:0002396;3.66e-23;3!CL:0000333;1.40e-14;5 | |ontology_enrichment_celltype_v019=CL:0000875;3.66e-23;3!CL:0002396;3.66e-23;3!CL:0000333;1.40e-14;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000875,4.09e-23,3;CL:0002396,4.09e-23,3;CL:0002393,1.21e-08,9;CL:0002397,1.21e-08,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;2.19e-12;6!DOID:171;5.73e-08;10 | |ontology_enrichment_disease_v019=DOID:169;2.19e-12;6!DOID:171;5.73e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:169,2.19e-12,6;DOID:171,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.89e-14!57;UBERON:0005068!1.89e-14!57;UBERON:0006241!1.89e-14!57;UBERON:0007135!1.89e-14!57;UBERON:0001894!7.12e-14!7;UBERON:0006222!7.12e-14!7;UBERON:0001897!5.60e-13!2;UBERON:0002616!1.10e-11!59;UBERON:0001017!7.48e-11!82;UBERON:0000073!1.37e-10!94;UBERON:0001016!1.37e-10!94;UBERON:0005743!3.11e-10!86;UBERON:0002780!8.58e-10!41;UBERON:0001890!8.58e-10!41;UBERON:0006240!8.58e-10!41;UBERON:0003080!1.57e-09!42;UBERON:0000955!1.60e-09!69;UBERON:0006238!1.60e-09!69;UBERON:0001896!6.09e-09!3;UBERON:0005290!6.09e-09!3;UBERON:0010096!6.09e-09!3;UBERON:0003075!8.61e-09!86;UBERON:0007284!8.61e-09!86;UBERON:0002346!2.69e-08!90;UBERON:0003296!7.00e-07!4;UBERON:0010133!7.00e-07!4;UBERON:0002022!7.40e-07!1 | |ontology_enrichment_uberon=UBERON:0001049!1.89e-14!57;UBERON:0005068!1.89e-14!57;UBERON:0006241!1.89e-14!57;UBERON:0007135!1.89e-14!57;UBERON:0001894!7.12e-14!7;UBERON:0006222!7.12e-14!7;UBERON:0001897!5.60e-13!2;UBERON:0002616!1.10e-11!59;UBERON:0001017!7.48e-11!82;UBERON:0000073!1.37e-10!94;UBERON:0001016!1.37e-10!94;UBERON:0005743!3.11e-10!86;UBERON:0002780!8.58e-10!41;UBERON:0001890!8.58e-10!41;UBERON:0006240!8.58e-10!41;UBERON:0003080!1.57e-09!42;UBERON:0000955!1.60e-09!69;UBERON:0006238!1.60e-09!69;UBERON:0001896!6.09e-09!3;UBERON:0005290!6.09e-09!3;UBERON:0010096!6.09e-09!3;UBERON:0003075!8.61e-09!86;UBERON:0007284!8.61e-09!86;UBERON:0002346!2.69e-08!90;UBERON:0003296!7.00e-07!4;UBERON:0010133!7.00e-07!4;UBERON:0002022!7.40e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001897;5.96e-34;2!UBERON:0010225;5.96e-34;2!UBERON:0002784;9.45e-18;4!UBERON:0000013;1.40e-14;5!UBERON:0002410;1.40e-14;5!UBERON:0001894;9.43e-11;7!UBERON:0000010;1.04e-08;8 | |ontology_enrichment_uberon_v019=UBERON:0001897;5.96e-34;2!UBERON:0010225;5.96e-34;2!UBERON:0002784;9.45e-18;4!UBERON:0000013;1.40e-14;5!UBERON:0002410;1.40e-14;5!UBERON:0001894;9.43e-11;7!UBERON:0000010;1.04e-08;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,5.04e-34,2;UBERON:0010225,5.04e-34,2;UBERON:0002784,8.69e-18,4;UBERON:0000013,1.40e-14,5;UBERON:0002410,1.40e-14,5;UBERON:0001894,8.99e-11,7;UBERON:0006222,8.99e-11,7;UBERON:0000010,1.04e-08,8 | |||
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|short_description=p2@PPP1R17 | |short_description=p2@PPP1R17 | ||
}} | }} |
Latest revision as of 07:07, 18 September 2015
Short description: | p2@PPP1R17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPP1R17_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | 0bp_to_uc003tcl.2, uc011kaf.1_5end |
EntrezGene: | PPP1R17 |
HGNC: | 16973 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 4.09e-23 | 3 |
CD14-low, CD16-positive monocyte | 4.09e-23 | 3 |
intermediate monocyte | 1.21e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
dorsal plus ventral thalamus | 5.04e-34 | 2 |
thalamic complex | 5.04e-34 | 2 |
regional part of diencephalon | 8.69e-18 | 4 |
sympathetic nervous system | 1.40e-14 | 5 |
autonomic nervous system | 1.40e-14 | 5 |
diencephalon | 8.99e-11 | 7 |
future diencephalon | 8.99e-11 | 7 |
peripheral nervous system | 1.04e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.19e-12 | 6 |
neuroectodermal tumor | 5.73e-08 | 10 |