FFCP PHASE1:Hg19::chr7:8301962..8301966,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3382 | |EntrezGene=3382 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5343 | |HGNC=5343 | ||
|TSSclassifier=strong | |||
|UniProt=Q05084 | |UniProt=Q05084 | ||
|association_with_transcript=-51bp_to_ENST00000402384_5end | |association_with_transcript=-51bp_to_ENST00000402384_5end | ||
|cluster_id=chr7:8301962..8301966,- | |||
|coexpression_cluster_id=C135 | |coexpression_cluster_id=C135 | ||
|description=CAGE_peak_17_at_ICA1_5end | |description=CAGE_peak_17_at_ICA1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000167!1.98e-10!1;CL:0000164!1.98e-10!1;CL:0000502!1.98e-10!1;CL:0000172!1.98e-10!1;CL:0000173!1.98e-10!1;CL:0002351!1.98e-10!1 | |ontology_enrichment_celltype=CL:0000167!1.98e-10!1;CL:0000164!1.98e-10!1;CL:0000502!1.98e-10!1;CL:0000172!1.98e-10!1;CL:0000173!1.98e-10!1;CL:0002351!1.98e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.48e-40;5!CL:0002321;1.22e-14;15 | |ontology_enrichment_celltype_v019=CL:0000333;1.48e-40;5!CL:0002321;1.22e-14;15 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:169!3.47e-14!6;DOID:4430!1.98e-10!1;DOID:0050619!5.79e-10!1;DOID:1357!5.79e-10!1;DOID:171!1.03e-08!10 | |ontology_enrichment_disease=DOID:169!3.47e-14!6;DOID:4430!1.98e-10!1;DOID:0050619!5.79e-10!1;DOID:1357!5.79e-10!1;DOID:171!1.03e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |ontology_enrichment_disease_v019=DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | ||
|ontology_enrichment_disease_v019_2=DOID:169,4.27e-34,6;DOID:171,3.81e-21,10;DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0001764!5.79e-10!1;UBERON:0001825!5.79e-10!1;UBERON:0002336!6.91e-10!1;UBERON:0001018!6.91e-10!1;UBERON:0002473!6.91e-10!1;UBERON:0005340!6.91e-10!1;UBERON:0002316!6.91e-10!1;UBERON:0003544!6.91e-10!1;UBERON:0001020!6.91e-10!1;UBERON:0005970!6.91e-10!1;UBERON:0002437!6.91e-10!1;UBERON:0000013!3.48e-08!5;UBERON:0002410!3.48e-08!5 | |ontology_enrichment_uberon=UBERON:0001764!5.79e-10!1;UBERON:0001825!5.79e-10!1;UBERON:0002336!6.91e-10!1;UBERON:0001018!6.91e-10!1;UBERON:0002473!6.91e-10!1;UBERON:0005340!6.91e-10!1;UBERON:0002316!6.91e-10!1;UBERON:0003544!6.91e-10!1;UBERON:0001020!6.91e-10!1;UBERON:0005970!6.91e-10!1;UBERON:0002437!6.91e-10!1;UBERON:0000013!3.48e-08!5;UBERON:0002410!3.48e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.48e-40;5!UBERON:0002410;1.48e-40;5!UBERON:0000010;2.62e-23;8 | |ontology_enrichment_uberon_v019=UBERON:0000013;1.48e-40;5!UBERON:0002410;1.48e-40;5!UBERON:0000010;2.62e-23;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.48e-40,5;UBERON:0002410,1.48e-40,5;UBERON:0000010,2.62e-23,8 | |||
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|short_description=p17@ICA1 | |short_description=p17@ICA1 | ||
}} | }} |
Latest revision as of 19:20, 19 September 2015
Short description: | p17@ICA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_ICA1_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | -51bp_to_ENST00000402384_5end |
EntrezGene: | ICA1 |
HGNC: | 5343 |
UniProt: | Q05084 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.48e-40 | 5 |
autonomic nervous system | 1.48e-40 | 5 |
peripheral nervous system | 2.62e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.27e-34 | 6 |
neuroectodermal tumor | 3.81e-21 | 10 |
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |