FFCP PHASE1:Hg19::chr8:37824009..37824022,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=155 | |EntrezGene=155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=288 | |HGNC=288 | ||
|TSSclassifier=strong | |||
|UniProt=A8KAG8,P13945 | |UniProt=A8KAG8,P13945 | ||
|association_with_transcript=161bp_to_NM_000025,uc003xkr.1_5end | |association_with_transcript=161bp_to_NM_000025,uc003xkr.1_5end | ||
|cluster_id=chr8:37824009..37824022,- | |||
|coexpression_cluster_id=C63 | |coexpression_cluster_id=C63 | ||
|description=CAGE_peak_3_at_ADRB3_5end | |description=CAGE_peak_3_at_ADRB3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;5.15e-21;5!CL:0002321;5.93e-08;15 | |ontology_enrichment_celltype_v019=CL:0000333;5.15e-21;5!CL:0002321;5.93e-08;15 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:171!1.94e-13!10 | |ontology_enrichment_disease=DOID:171!1.94e-13!10 | ||
|ontology_enrichment_disease_v019=DOID:3193;4.52e-50;2!DOID:962;4.52e-50;2!DOID:171;2.00e-40;10!DOID:1192;5.96e-34;3!DOID:3095;3.41e-19;22!DOID:2994;3.41e-19;22!DOID:169;9.07e-18;6!DOID:3093;1.33e-09;11 | |ontology_enrichment_disease_v019=DOID:3193;4.52e-50;2!DOID:962;4.52e-50;2!DOID:171;2.00e-40;10!DOID:1192;5.96e-34;3!DOID:3095;3.41e-19;22!DOID:2994;3.41e-19;22!DOID:169;9.07e-18;6!DOID:3093;1.33e-09;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3193,4.52e-50,2;DOID:962,4.52e-50,2;DOID:171,2.00e-40,10;DOID:1192,5.96e-34,3;DOID:3095,3.41e-19,22;DOID:2994,3.41e-19,22;DOID:169,9.07e-18,6;DOID:3093,1.33e-09,11 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003714;4.52e-50;2!UBERON:0002346;5.56e-26;4!UBERON:0000923;5.56e-26;4!UBERON:0010316;5.56e-26;4!UBERON:0005291;5.56e-26;4!UBERON:0002050;4.21e-21;5!UBERON:0005423;4.21e-21;5!UBERON:0000013;5.15e-21;5!UBERON:0002410;5.15e-21;5!UBERON:0000010;2.45e-12;8 | |ontology_enrichment_uberon_v019=UBERON:0003714;4.52e-50;2!UBERON:0002346;5.56e-26;4!UBERON:0000923;5.56e-26;4!UBERON:0010316;5.56e-26;4!UBERON:0005291;5.56e-26;4!UBERON:0002050;4.21e-21;5!UBERON:0005423;4.21e-21;5!UBERON:0000013;5.15e-21;5!UBERON:0002410;5.15e-21;5!UBERON:0000010;2.45e-12;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,4.52e-50,2;UBERON:0000013,5.15e-21,5;UBERON:0002410,5.15e-21,5;UBERON:0000010,2.45e-12,8 | |||
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|short_description=p3@ADRB3 | |short_description=p3@ADRB3 | ||
}} | }} |
Latest revision as of 02:44, 18 September 2015
Short description: | p3@ADRB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ADRB3_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | 161bp_to_NM_000025, uc003xkr.1_5end |
EntrezGene: | ADRB3 |
HGNC: | 288 |
UniProt: | A8KAG8P13945 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 4.52e-50 | 2 |
sympathetic nervous system | 5.15e-21 | 5 |
autonomic nervous system | 5.15e-21 | 5 |
peripheral nervous system | 2.45e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 4.52e-50 | 2 |
neurofibroma | 4.52e-50 | 2 |
neuroectodermal tumor | 2.00e-40 | 10 |
peripheral nervous system neoplasm | 5.96e-34 | 3 |
germ cell and embryonal cancer | 3.41e-19 | 22 |
germ cell cancer | 3.41e-19 | 22 |
neuroendocrine tumor | 9.07e-18 | 6 |
nervous system cancer | 1.33e-09 | 11 |