FFCP PHASE1:Hg19::chr21:45705733..45705743,+: Difference between revisions
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|id=chr21:45705733..45705743,+
|short_description=p2@AIRE
|description=CAGE_peak_2_at_AIRE_5end
|association_with_transcript=4bp_to_ENST00000527919_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=326 | |EntrezGene=326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=360 | |HGNC=360 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000527919_5end | |||
|cluster_id=chr21:45705733..45705743,+ | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_2_at_AIRE_5end | |||
|id=chr21:45705733..45705743,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.28e-84;7!CL:0000586;1.28e-84;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.28e-84,7;CL:0000586,1.28e-84,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.10e-59;10!UBERON:0005564;1.10e-59;10!UBERON:0006603;3.69e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.08e-28,22;DOID:2994,7.08e-28,22 | |||
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| ||
|short_description=p2@AIRE | |||
}} | }} |
Latest revision as of 18:32, 18 September 2015
Short description: | p2@AIRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AIRE_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 4bp_to_ENST00000527919_5end |
EntrezGene: | AIRE |
HGNC: | 360 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.28e-84 | 7 |
germ cell | 1.28e-84 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 3.11e-74 | 8 |
male reproductive organ | 2.16e-54 | 11 |
gonad | 3.84e-29 | 21 |
indifferent external genitalia | 3.84e-29 | 21 |
indifferent gonad | 3.84e-29 | 21 |
gonad primordium | 3.84e-29 | 21 |
external genitalia | 7.08e-28 | 22 |
male organism | 7.08e-28 | 22 |
male reproductive system | 7.08e-28 | 22 |
body cavity | 5.85e-14 | 46 |
reproductive organ | 2.00e-13 | 48 |
body cavity or lining | 3.57e-13 | 49 |
body cavity precursor | 4.68e-12 | 54 |
reproductive structure | 3.99e-11 | 59 |
reproductive system | 3.99e-11 | 59 |
anatomical cavity | 8.52e-11 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.08e-28 | 22 |
germ cell cancer | 7.08e-28 | 22 |