FFCP PHASE1:Hg19::chr7:27225007..27225030,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221883 | |EntrezGene=221883 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=24957 | |HGNC=24957 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000522674,NR_002795,uc003syz.1_5end | |association_with_transcript=0bp_to_ENST00000522674,NR_002795,uc003syz.1_5end | ||
|cluster_id=chr7:27225007..27225030,+ | |||
|coexpression_cluster_id=C2891 | |coexpression_cluster_id=C2891 | ||
|description=CAGE_peak_2_at_HOXA11-AS1_5end | |description=CAGE_peak_2_at_HOXA11-AS1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.29e-12;10!CL:1000494;1.29e-12;10!CL:1000497;1.50e-11;17!CL:0002518;1.50e-11;17!CL:1000449;3.63e-11;15!CL:0000244;9.08e-08;4!CL:0000731;9.08e-08;4!CL:0002681;2.27e-07;12!CL:0002584;2.27e-07;12 | |ontology_enrichment_celltype_v019=CL:1000507;1.29e-12;10!CL:1000494;1.29e-12;10!CL:1000497;1.50e-11;17!CL:0002518;1.50e-11;17!CL:1000449;3.63e-11;15!CL:0000244;9.08e-08;4!CL:0000731;9.08e-08;4!CL:0002681;2.27e-07;12!CL:0002584;2.27e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.12e-12,10;CL:1000494,1.12e-12,10;CL:1000497,1.62e-11,17;CL:0002518,1.62e-11,17;CL:1000449,4.24e-11,15;CL:0000244,6.91e-08,4;CL:0000731,6.91e-08,4;CL:0002681,2.83e-07,12;CL:0002584,2.83e-07,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006554;1.45e-19;30!UBERON:0001008;1.45e-19;30!UBERON:0004211;1.29e-12;10!UBERON:0009773;1.29e-12;10!UBERON:0001231;1.29e-12;10!UBERON:0004810;1.29e-12;10!UBERON:0000489;2.28e-12;29!UBERON:0002113;3.57e-12;24!UBERON:0011143;3.57e-12;24!UBERON:0003937;6.19e-12;12!UBERON:0005399;6.19e-12;12!UBERON:0006555;3.63e-11;15!UBERON:0004819;3.63e-11;15!UBERON:0001285;3.63e-11;15!UBERON:0007684;3.63e-11;15!UBERON:0002367;6.50e-11;11!UBERON:0010147;6.50e-11;11!UBERON:0010260;1.56e-09;9!UBERON:0001737;7.98e-09;9!UBERON:0001557;7.98e-09;9!UBERON:0000365;9.34e-09;5!UBERON:0003101;6.14e-08;22!UBERON:0000079;6.14e-08;22!UBERON:0001225;2.27e-07;12!UBERON:0008987;2.27e-07;12!UBERON:0005910;3.41e-07;6!UBERON:0001638;4.00e-07;9!UBERON:0003920;4.00e-07;9!UBERON:0004582;4.00e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0006554;1.45e-19;30!UBERON:0001008;1.45e-19;30!UBERON:0004211;1.29e-12;10!UBERON:0009773;1.29e-12;10!UBERON:0001231;1.29e-12;10!UBERON:0004810;1.29e-12;10!UBERON:0000489;2.28e-12;29!UBERON:0002113;3.57e-12;24!UBERON:0011143;3.57e-12;24!UBERON:0003937;6.19e-12;12!UBERON:0005399;6.19e-12;12!UBERON:0006555;3.63e-11;15!UBERON:0004819;3.63e-11;15!UBERON:0001285;3.63e-11;15!UBERON:0007684;3.63e-11;15!UBERON:0002367;6.50e-11;11!UBERON:0010147;6.50e-11;11!UBERON:0010260;1.56e-09;9!UBERON:0001737;7.98e-09;9!UBERON:0001557;7.98e-09;9!UBERON:0000365;9.34e-09;5!UBERON:0003101;6.14e-08;22!UBERON:0000079;6.14e-08;22!UBERON:0001225;2.27e-07;12!UBERON:0008987;2.27e-07;12!UBERON:0005910;3.41e-07;6!UBERON:0001638;4.00e-07;9!UBERON:0003920;4.00e-07;9!UBERON:0004582;4.00e-07;9 | ||
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| ||
|short_description=p2@HOXA11-AS1 | |short_description=p2@HOXA11-AS1 | ||
}} | }} |
Latest revision as of 02:12, 18 September 2015
Short description: | p2@HOXA11-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXA11-AS1_5end |
Coexpression cluster: | C2891_Mesenchymal_uterus_smallcell_small_leiomyoma_cervix_acute |
Association with transcript: | 0bp_to_ENST00000522674, NR_002795, uc003syz.1_5end |
EntrezGene: | HOXA11-AS1 |
HGNC: | 24957 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.12e-12 | 10 |
nephron tubule epithelial cell | 1.12e-12 | 10 |
kidney cell | 1.62e-11 | 17 |
kidney epithelial cell | 1.62e-11 | 17 |
epithelial cell of nephron | 4.24e-11 | 15 |
transitional epithelial cell | 6.91e-08 | 4 |
urothelial cell | 6.91e-08 | 4 |
kidney cortical cell | 2.83e-07 | 12 |
renal cortical epithelial cell | 2.83e-07 | 12 |