FFCP PHASE1:Hg19::chr10:112206925..112206940,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:112206925..112206940,- | |||
|coexpression_cluster_id=C439 | |coexpression_cluster_id=C439 | ||
|description=CAGE_peak_at_chr10:112206925..112206940,- | |description=CAGE_peak_at_chr10:112206925..112206940,- | ||
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|ontology_enrichment_celltype=CL:0000359!8.93e-12!32;CL:0002139!6.99e-11!24;CL:0000222!5.43e-09!119;CL:0002144!2.77e-08!3;CL:0000192!4.46e-08!42;CL:0000514!4.46e-08!42;CL:0002371!1.24e-07!591;CL:0000187!3.33e-07!54;CL:0000183!3.83e-07!59;CL:0000144!4.82e-07!625 | |ontology_enrichment_celltype=CL:0000359!8.93e-12!32;CL:0002139!6.99e-11!24;CL:0000222!5.43e-09!119;CL:0002144!2.77e-08!3;CL:0000192!4.46e-08!42;CL:0000514!4.46e-08!42;CL:0002371!1.24e-07!591;CL:0000187!3.33e-07!54;CL:0000183!3.83e-07!59;CL:0000144!4.82e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002144;1.22e-27;3!CL:0002591;6.31e-21;1!CL:0002138;4.53e-14;6!CL:0002139;1.31e-13;24!CL:0002078;1.03e-07;45 | |ontology_enrichment_celltype_v019=CL:0002144;1.22e-27;3!CL:0002591;6.31e-21;1!CL:0002138;4.53e-14;6!CL:0002139;1.31e-13;24!CL:0002078;1.03e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0002144,1.39e-27,3;CL:0002591,9.43e-21,1;CL:0005020,3.71e-14,6;CL:0002138,3.71e-14,6;CL:0005022,3.71e-14,6;CL:0002139,1.23e-13,24;CL:0000115,3.27e-09,36;CL:0002078,1.98e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;4.53e-14;6 | |ontology_enrichment_development_v019=CL:0005022;4.53e-14;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:225;3.45e-21;1!DOID:74;2.73e-11;2 | |ontology_enrichment_disease_v019=DOID:225;3.45e-21;1!DOID:74;2.73e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:225,3.45e-21,1;DOID:74,2.73e-11,2 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;1.22e-27;3!UBERON:0001915;1.22e-27;3!UBERON:0001982;1.22e-27;3!UBERON:0000078;3.70e-11;2!UBERON:0002012;3.70e-11;2!UBERON:0008886;3.70e-11;2!UBERON:0001473;8.47e-11;8!UBERON:0004536;8.47e-11;8!UBERON:0006558;8.47e-11;8!UBERON:0002465;7.96e-09;10 | |ontology_enrichment_uberon_v019=UBERON:0010523;1.22e-27;3!UBERON:0001915;1.22e-27;3!UBERON:0001982;1.22e-27;3!UBERON:0000078;3.70e-11;2!UBERON:0002012;3.70e-11;2!UBERON:0008886;3.70e-11;2!UBERON:0001473;8.47e-11;8!UBERON:0004536;8.47e-11;8!UBERON:0006558;8.47e-11;8!UBERON:0002465;7.96e-09;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,1.39e-27,3;UBERON:0001915,1.39e-27,3;UBERON:0001982,1.39e-27,3;UBERON:0000078,4.52e-11,2;UBERON:0007497,4.52e-11,2;UBERON:0003643,4.52e-11,2;UBERON:0003504,4.52e-11,2;UBERON:0003469,4.52e-11,2;UBERON:0003496,4.52e-11,2;UBERON:0002012,4.52e-11,2;UBERON:0008886,4.52e-11,2;UBERON:0007303,4.52e-11,2;UBERON:0002061,4.52e-11,2;UBERON:0005432,4.52e-11,2;UBERON:0004363,4.52e-11,2;UBERON:0001473,7.30e-11,8;UBERON:0004536,7.30e-11,8;UBERON:0006558,7.30e-11,8;UBERON:0002465,7.07e-09,10;UBERON:0004145,8.29e-08,3;UBERON:0000055,2.14e-07,68 | |||
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| ||
|short_description=p@chr10:112206925..112206940,- | |short_description=p@chr10:112206925..112206940,- | ||
}} | }} |
Latest revision as of 10:22, 23 July 2015
Short description: | p@chr10:112206925..112206940, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:112206925..112206940, - |
Coexpression cluster: | C439_acute_CD14_Macrophage_biphenotypic_neuroblastoma_Monocytederived_myelodysplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 1.39e-27 | 3 |
smooth muscle cell of the pulmonary artery | 9.43e-21 | 1 |
lymphangioblast | 3.71e-14 | 6 |
endothelial cell of lymphatic vessel | 3.71e-14 | 6 |
vascular lymphangioblast | 3.71e-14 | 6 |
endothelial cell of vascular tree | 1.23e-13 | 24 |
endothelial cell | 3.27e-09 | 36 |
meso-epithelial cell | 1.98e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 1.39e-27 | 3 |
endothelium of capillary | 1.39e-27 | 3 |
capillary | 1.39e-27 | 3 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.52e-11 | 2 |
developing epithelial placode | 4.52e-11 | 2 |
respiratory system arterial blood vessel | 4.52e-11 | 2 |
respiratory system blood vessel | 4.52e-11 | 2 |
respiratory system artery | 4.52e-11 | 2 |
head blood vessel | 4.52e-11 | 2 |
pulmonary artery | 4.52e-11 | 2 |
pulmonary vascular system | 4.52e-11 | 2 |
pharyngeal vasculature | 4.52e-11 | 2 |
truncus arteriosus | 4.52e-11 | 2 |
aortic sac | 4.52e-11 | 2 |
pharyngeal arch artery | 4.52e-11 | 2 |
lymphatic vessel | 7.30e-11 | 8 |
lymph vasculature | 7.30e-11 | 8 |
lymphatic part of lymphoid system | 7.30e-11 | 8 |
lymphoid system | 7.07e-09 | 10 |
outflow tract | 8.29e-08 | 3 |
vessel | 2.14e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
syndrome | 3.45e-21 | 1 |
hematopoietic system disease | 2.73e-11 | 2 |