FFCP PHASE1:Hg19::chr1:22985947..22985959,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=713 | |EntrezGene=713 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1242 | |HGNC=1242 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AB590382,DQ891531,DQ894720_5end | |association_with_transcript=0bp_to_AB590382,DQ891531,DQ894720_5end | ||
|cluster_id=chr1:22985947..22985959,+ | |||
|coexpression_cluster_id=C67 | |coexpression_cluster_id=C67 | ||
|description=CAGE_peak_16_at_C1QB_5end | |description=CAGE_peak_16_at_C1QB_5end | ||
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|ontology_enrichment_celltype=CL:0002619!3.13e-11!3 | |ontology_enrichment_celltype=CL:0002619!3.13e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0002619;2.28e-85;3!CL:0000235;1.04e-19;6!CL:0000115;1.84e-07;36 | |ontology_enrichment_celltype_v019=CL:0002619;2.28e-85;3!CL:0000235;1.04e-19;6!CL:0000115;1.84e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0002619,2.28e-85,3;CL:0000235,1.04e-19,6;CL:0002194,3.62e-12,59;CL:0000576,3.62e-12,59;CL:0000040,3.62e-12,59;CL:0000559,3.62e-12,59;CL:0002009,8.71e-12,61;CL:0000839,6.24e-11,66;CL:0000557,8.94e-11,67;CL:0000766,4.66e-10,72;CL:0000115,7.59e-08,36;CL:0000763,8.11e-07,108;CL:0000049,8.11e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.64e-29;1!UBERON:0003056;1.14e-10;3 | |ontology_enrichment_development_v019=UBERON:0005425;3.64e-29;1!UBERON:0003056;1.14e-10;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-51!115;UBERON:0001049!2.83e-23!57;UBERON:0005068!2.83e-23!57;UBERON:0006241!2.83e-23!57;UBERON:0007135!2.83e-23!57;UBERON:0002616!2.86e-18!59;UBERON:0003075!8.21e-18!86;UBERON:0007284!8.21e-18!86;UBERON:0002346!9.99e-17!90;UBERON:0005743!5.26e-16!86;UBERON:0002308!7.98e-16!9;UBERON:0000125!7.98e-16!9;UBERON:0001017!1.25e-15!82;UBERON:0000073!2.28e-15!94;UBERON:0001016!2.28e-15!94;UBERON:0000955!1.41e-14!69;UBERON:0006238!1.41e-14!69;UBERON:0002780!2.14e-14!41;UBERON:0001890!2.14e-14!41;UBERON:0006240!2.14e-14!41;UBERON:0003080!5.70e-14!42;UBERON:0002020!1.71e-13!34;UBERON:0003528!1.71e-13!34;UBERON:0002298!1.22e-12!8;UBERON:0002791!7.12e-12!33;UBERON:0002420!1.70e-11!9;UBERON:0007245!1.70e-11!9;UBERON:0010009!1.70e-11!9;UBERON:0010011!1.70e-11!9;UBERON:0000454!1.70e-11!9;UBERON:0001893!1.88e-11!34;UBERON:0003076!2.76e-11!15;UBERON:0003057!2.76e-11!15;UBERON:0009663!1.08e-10!7;UBERON:0004732!2.44e-10!13;UBERON:0006331!9.23e-10!3;UBERON:0003056!9.48e-10!61;UBERON:0000062!1.25e-09!511;UBERON:0000988!1.33e-09!3;UBERON:0001869!1.13e-08!32;UBERON:0000033!1.55e-08!123;UBERON:0004733!3.52e-08!12;UBERON:0002028!3.52e-08!12;UBERON:0007277!3.52e-08!12;UBERON:0000153!6.92e-08!129;UBERON:0007811!6.92e-08!129;UBERON:0001875!1.32e-07!2;UBERON:0006514!1.32e-07!2;UBERON:0005162!1.66e-07!2;UBERON:0000122!1.66e-07!2;UBERON:0004121!2.52e-07!169;UBERON:0002148!3.01e-07!2;UBERON:0009662!3.01e-07!2;UBERON:0000924!5.17e-07!173;UBERON:0006601!5.17e-07!173;UBERON:0000025!5.88e-07!194 | |ontology_enrichment_uberon=UBERON:0007023!1.07e-51!115;UBERON:0001049!2.83e-23!57;UBERON:0005068!2.83e-23!57;UBERON:0006241!2.83e-23!57;UBERON:0007135!2.83e-23!57;UBERON:0002616!2.86e-18!59;UBERON:0003075!8.21e-18!86;UBERON:0007284!8.21e-18!86;UBERON:0002346!9.99e-17!90;UBERON:0005743!5.26e-16!86;UBERON:0002308!7.98e-16!9;UBERON:0000125!7.98e-16!9;UBERON:0001017!1.25e-15!82;UBERON:0000073!2.28e-15!94;UBERON:0001016!2.28e-15!94;UBERON:0000955!1.41e-14!69;UBERON:0006238!1.41e-14!69;UBERON:0002780!2.14e-14!41;UBERON:0001890!2.14e-14!41;UBERON:0006240!2.14e-14!41;UBERON:0003080!5.70e-14!42;UBERON:0002020!1.71e-13!34;UBERON:0003528!1.71e-13!34;UBERON:0002298!1.22e-12!8;UBERON:0002791!7.12e-12!33;UBERON:0002420!1.70e-11!9;UBERON:0007245!1.70e-11!9;UBERON:0010009!1.70e-11!9;UBERON:0010011!1.70e-11!9;UBERON:0000454!1.70e-11!9;UBERON:0001893!1.88e-11!34;UBERON:0003076!2.76e-11!15;UBERON:0003057!2.76e-11!15;UBERON:0009663!1.08e-10!7;UBERON:0004732!2.44e-10!13;UBERON:0006331!9.23e-10!3;UBERON:0003056!9.48e-10!61;UBERON:0000062!1.25e-09!511;UBERON:0000988!1.33e-09!3;UBERON:0001869!1.13e-08!32;UBERON:0000033!1.55e-08!123;UBERON:0004733!3.52e-08!12;UBERON:0002028!3.52e-08!12;UBERON:0007277!3.52e-08!12;UBERON:0000153!6.92e-08!129;UBERON:0007811!6.92e-08!129;UBERON:0001875!1.32e-07!2;UBERON:0006514!1.32e-07!2;UBERON:0005162!1.66e-07!2;UBERON:0000122!1.66e-07!2;UBERON:0004121!2.52e-07!169;UBERON:0002148!3.01e-07!2;UBERON:0009662!3.01e-07!2;UBERON:0000924!5.17e-07!173;UBERON:0006601!5.17e-07!173;UBERON:0000025!5.88e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.64e-29;1!UBERON:0001785;3.64e-29;1!UBERON:0002464;3.64e-29;1!UBERON:0004904;3.64e-29;1!UBERON:0001021;3.64e-29;1!UBERON:0003714;2.55e-15;2!UBERON:0005162;2.55e-15;2!UBERON:0000122;2.55e-15;2!UBERON:0002106;9.43e-11;3!UBERON:0004177;5.87e-07;5!UBERON:0005057;5.87e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000941;3.64e-29;1!UBERON:0001785;3.64e-29;1!UBERON:0002464;3.64e-29;1!UBERON:0004904;3.64e-29;1!UBERON:0001021;3.64e-29;1!UBERON:0003714;2.55e-15;2!UBERON:0005162;2.55e-15;2!UBERON:0000122;2.55e-15;2!UBERON:0002106;9.43e-11;3!UBERON:0004177;5.87e-07;5!UBERON:0005057;5.87e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.20e-29,1;UBERON:0001785,4.20e-29,1;UBERON:0002464,4.20e-29,1;UBERON:0004904,4.20e-29,1;UBERON:0001021,4.20e-29,1;UBERON:0003902,4.20e-29,1;UBERON:0005425,4.20e-29,1;UBERON:0003714,2.74e-15,2;UBERON:0005162,2.74e-15,2;UBERON:0000122,2.74e-15,2;UBERON:0002405,4.18e-11,93;UBERON:0002106,8.99e-11,3;UBERON:0004854,8.99e-11,3;UBERON:0009034,8.99e-11,3;UBERON:0002095,8.99e-11,3;UBERON:0004782,8.99e-11,3;UBERON:0003281,8.99e-11,3;UBERON:0009664,8.99e-11,3;UBERON:0002296,8.99e-11,3;UBERON:0005602,8.99e-11,3;UBERON:0001179,8.99e-11,3;UBERON:0006293,8.99e-11,3;UBERON:0002390,1.48e-10,98;UBERON:0003061,1.48e-10,98;UBERON:0002193,1.33e-09,108;UBERON:0002371,1.50e-09,76;UBERON:0001474,7.02e-09,82;UBERON:0001781,2.61e-08,4;UBERON:0004765,4.02e-08,90;UBERON:0001434,2.43e-07,100 | |||
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|short_description=p16@C1QB | |short_description=p16@C1QB | ||
}} | }} |
Latest revision as of 06:32, 16 September 2015
Short description: | p16@C1QB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_C1QB_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_AB590382, DQ891531, DQ894720_5end |
EntrezGene: | C1QB |
HGNC: | 1242 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 2.28e-85 | 3 |
macrophage | 1.04e-19 | 6 |
monopoietic cell | 3.62e-12 | 59 |
monocyte | 3.62e-12 | 59 |
monoblast | 3.62e-12 | 59 |
promonocyte | 3.62e-12 | 59 |
macrophage dendritic cell progenitor | 8.71e-12 | 61 |
myeloid lineage restricted progenitor cell | 6.24e-11 | 66 |
granulocyte monocyte progenitor cell | 8.94e-11 | 67 |
myeloid leukocyte | 4.66e-10 | 72 |
endothelial cell | 7.59e-08 | 36 |
myeloid cell | 8.11e-07 | 108 |
common myeloid progenitor | 8.11e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.20e-29 | 1 |
cranial nerve | 4.20e-29 | 1 |
nerve trunk | 4.20e-29 | 1 |
nerve connecting eye with brain | 4.20e-29 | 1 |
nerve | 4.20e-29 | 1 |
retinal neural layer | 4.20e-29 | 1 |
presumptive neural retina | 4.20e-29 | 1 |
neural tissue | 2.74e-15 | 2 |
multi cell component structure | 2.74e-15 | 2 |
neuron projection bundle | 2.74e-15 | 2 |
immune system | 4.18e-11 | 93 |
spleen | 8.99e-11 | 3 |
gastrointestinal system mesentery | 8.99e-11 | 3 |
stomach region | 8.99e-11 | 3 |
mesentery | 8.99e-11 | 3 |
gastrointestinal system serosa | 8.99e-11 | 3 |
mesentery of stomach | 8.99e-11 | 3 |
gut mesentery | 8.99e-11 | 3 |
dorsal mesentery | 8.99e-11 | 3 |
dorsal mesogastrium | 8.99e-11 | 3 |
peritoneal cavity | 8.99e-11 | 3 |
spleen primordium | 8.99e-11 | 3 |
hematopoietic system | 1.48e-10 | 98 |
blood island | 1.48e-10 | 98 |
hemolymphoid system | 1.33e-09 | 108 |
bone marrow | 1.50e-09 | 76 |
bone element | 7.02e-09 | 82 |
layer of retina | 2.61e-08 | 4 |
skeletal element | 4.02e-08 | 90 |
skeletal system | 2.43e-07 | 100 |