FFCP PHASE1:Hg19::chr11:15583363..15583369,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:15583363..15583369,+ | |||
|coexpression_cluster_id=C330 | |coexpression_cluster_id=C330 | ||
|description=CAGE_peak_at_chr11:15583363..15583369,+ | |description=CAGE_peak_at_chr11:15583363..15583369,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002150!1.17e-10!3;CL:0000861!1.17e-10!3 | |ontology_enrichment_celltype=CL:0002150!1.17e-10!3;CL:0000861!1.17e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0000322;6.73e-11;3 | |ontology_enrichment_celltype_v019=CL:0000322;6.73e-11;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,6.73e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.07e-12;10!UBERON:0005564;3.07e-12;10 | |ontology_enrichment_development_v019=UBERON:0009117;3.07e-12;10!UBERON:0005564;3.07e-12;10 | ||
|ontology_enrichment_disease=DOID:162!3.49e-09!235;DOID:14566!8.02e-09!239 | |ontology_enrichment_disease=DOID:162!3.49e-09!235;DOID:14566!8.02e-09!239 | ||
|ontology_enrichment_disease_v019=DOID:3910;1.15e-15;2!DOID:3908;4.79e-07;5 | |ontology_enrichment_disease_v019=DOID:3910;1.15e-15;2!DOID:3908;4.79e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,1.15e-15,2;DOID:3908,4.79e-07,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.15e-15;2!UBERON:0002173;1.15e-15;2!UBERON:0002186;1.15e-15;2!UBERON:0000473;4.86e-15;8!UBERON:0003135;3.22e-11;11!UBERON:0004821;6.73e-11;3!UBERON:0007499;6.73e-11;3!UBERON:0003215;6.73e-11;3!UBERON:0010368;6.73e-11;3!UBERON:0009911;6.73e-11;3!UBERON:0002299;6.73e-11;3!UBERON:0006524;6.73e-11;3!UBERON:0008874;6.73e-11;3!UBERON:0002169;6.73e-11;3!UBERON:0004894;6.73e-11;3!UBERON:0009856;1.70e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0004903;1.15e-15;2!UBERON:0002173;1.15e-15;2!UBERON:0002186;1.15e-15;2!UBERON:0000473;4.86e-15;8!UBERON:0003135;3.22e-11;11!UBERON:0004821;6.73e-11;3!UBERON:0007499;6.73e-11;3!UBERON:0003215;6.73e-11;3!UBERON:0010368;6.73e-11;3!UBERON:0009911;6.73e-11;3!UBERON:0002299;6.73e-11;3!UBERON:0006524;6.73e-11;3!UBERON:0008874;6.73e-11;3!UBERON:0002169;6.73e-11;3!UBERON:0004894;6.73e-11;3!UBERON:0009856;1.70e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.15e-15,2;UBERON:0002173,1.15e-15,2;UBERON:0002186,1.15e-15,2;UBERON:0000473,4.69e-15,8;UBERON:0003135,3.14e-11,11;UBERON:0004821,6.73e-11,3;UBERON:0003215,6.73e-11,3;UBERON:0010368,6.73e-11,3;UBERON:0009911,6.73e-11,3;UBERON:0002299,6.73e-11,3;UBERON:0006524,6.73e-11,3;UBERON:0008874,6.73e-11,3;UBERON:0002169,6.73e-11,3;UBERON:0004894,6.73e-11,3 | |||
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| ||
|short_description=p@chr11:15583363..15583369,+ | |short_description=p@chr11:15583363..15583369,+ | ||
}} | }} |
Latest revision as of 20:20, 23 July 2015
Short description: | p@chr11:15583363..15583369, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:15583363..15583369, + |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 6.73e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.15e-15 | 2 |
alveolar duct | 1.15e-15 | 2 |
bronchiole | 1.15e-15 | 2 |
testis | 4.69e-15 | 8 |
male reproductive organ | 3.14e-11 | 11 |
pulmonary alveolus epithelium | 6.73e-11 | 3 |
alveolus | 6.73e-11 | 3 |
pulmonary lobule | 6.73e-11 | 3 |
lobule | 6.73e-11 | 3 |
alveolus of lung | 6.73e-11 | 3 |
alveolar system | 6.73e-11 | 3 |
pulmonary acinus | 6.73e-11 | 3 |
alveolar sac | 6.73e-11 | 3 |
alveolar wall | 6.73e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.15e-15 | 2 |
non-small cell lung carcinoma | 4.79e-07 | 5 |