FFCP PHASE1:Hg19::chr19:18390965..18391043,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18390965..18391043,- | |||
|coexpression_cluster_id=C922 | |coexpression_cluster_id=C922 | ||
|description=CAGE_peak_at_chr19:18390965..18391043,- | |description=CAGE_peak_at_chr19:18390965..18391043,- | ||
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|ontology_enrichment_celltype=CL:0000738!1.99e-11!140;CL:0000766!8.56e-11!76;CL:0000988!1.45e-10!182;CL:0002057!1.71e-10!42;CL:0000037!8.24e-10!172;CL:0000566!8.24e-10!172;CL:0002032!7.55e-09!165;CL:0000837!7.55e-09!165;CL:0000860!1.23e-08!45;CL:0000763!1.26e-08!112;CL:0000049!1.26e-08!112;CL:0000557!3.70e-08!71;CL:0002031!1.77e-07!124;CL:0000839!3.08e-07!70 | |ontology_enrichment_celltype=CL:0000738!1.99e-11!140;CL:0000766!8.56e-11!76;CL:0000988!1.45e-10!182;CL:0002057!1.71e-10!42;CL:0000037!8.24e-10!172;CL:0000566!8.24e-10!172;CL:0002032!7.55e-09!165;CL:0000837!7.55e-09!165;CL:0000860!1.23e-08!45;CL:0000763!1.26e-08!112;CL:0000049!1.26e-08!112;CL:0000557!3.70e-08!71;CL:0002031!1.77e-07!124;CL:0000839!3.08e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.16e-09;33!CL:0002057;8.16e-09;33!CL:0000766;5.71e-07;69 | |ontology_enrichment_celltype_v019=CL:0000860;8.16e-09;33!CL:0002057;8.16e-09;33!CL:0000766;5.71e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.55e-12,136;CL:0000766,2.03e-12,72;CL:0000988,5.98e-12,177;CL:0000037,7.66e-11,168;CL:0000860,1.43e-10,42;CL:0002057,1.43e-10,42;CL:0000763,7.14e-10,108;CL:0000049,7.14e-10,108;CL:0002032,7.88e-10,161;CL:0000837,7.88e-10,161;CL:0000557,1.56e-09,67;CL:0000473,2.17e-09,48;CL:0000234,2.17e-09,48;CL:0000839,1.67e-08,66;CL:0002031,2.40e-08,120;CL:0002087,2.59e-07,115;CL:0002009,3.17e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.74e-08;42 | |ontology_enrichment_development_v019=CL:0002057;1.74e-08;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.45e-07!80;UBERON:0002405!1.45e-07!115;UBERON:0002390!1.63e-07!102;UBERON:0003061!1.63e-07!102;UBERON:0001474!2.36e-07!86;UBERON:0002193!6.85e-07!112 | |ontology_enrichment_uberon=UBERON:0002371!1.45e-07!80;UBERON:0002405!1.45e-07!115;UBERON:0002390!1.63e-07!102;UBERON:0003061!1.63e-07!102;UBERON:0001474!2.36e-07!86;UBERON:0002193!6.85e-07!112 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.48e-09,76;UBERON:0001474,1.59e-08,82;UBERON:0002390,1.64e-08,98;UBERON:0003061,1.64e-08,98;UBERON:0002193,8.70e-08,108;UBERON:0002405,1.36e-07,93;UBERON:0004765,8.82e-07,90 | |||
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| ||
|short_description=p@chr19:18390965..18391043,- | |short_description=p@chr19:18390965..18391043,- | ||
}} | }} |
Latest revision as of 05:07, 26 July 2015
Short description: | p@chr19:18390965..18391043, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18390965..18391043, - |
Coexpression cluster: | C922_Mast_Eosinophils_mature_Basophils_CD19_CD4_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.55e-12 | 136 |
myeloid leukocyte | 2.03e-12 | 72 |
hematopoietic cell | 5.98e-12 | 177 |
hematopoietic stem cell | 7.66e-11 | 168 |
classical monocyte | 1.43e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.43e-10 | 42 |
myeloid cell | 7.14e-10 | 108 |
common myeloid progenitor | 7.14e-10 | 108 |
hematopoietic oligopotent progenitor cell | 7.88e-10 | 161 |
hematopoietic multipotent progenitor cell | 7.88e-10 | 161 |
granulocyte monocyte progenitor cell | 1.56e-09 | 67 |
defensive cell | 2.17e-09 | 48 |
phagocyte | 2.17e-09 | 48 |
myeloid lineage restricted progenitor cell | 1.67e-08 | 66 |
hematopoietic lineage restricted progenitor cell | 2.40e-08 | 120 |
nongranular leukocyte | 2.59e-07 | 115 |
macrophage dendritic cell progenitor | 3.17e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.48e-09 | 76 |
bone element | 1.59e-08 | 82 |
hematopoietic system | 1.64e-08 | 98 |
blood island | 1.64e-08 | 98 |
hemolymphoid system | 8.70e-08 | 108 |
immune system | 1.36e-07 | 93 |
skeletal element | 8.82e-07 | 90 |