FFCP PHASE1:Hg19::chr10:28884887..28884922,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51322 | |EntrezGene=51322 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17327 | |HGNC=17327 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000476046_5end | |association_with_transcript=31bp_to_ENST00000476046_5end | ||
|cluster_id=chr10:28884887..28884922,+ | |||
|coexpression_cluster_id=C3011 | |coexpression_cluster_id=C3011 | ||
|description=CAGE_peak_12_at_WAC_5end | |description=CAGE_peak_12_at_WAC_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!5.41e-07!42 | |ontology_enrichment_celltype=CL:0002057!5.41e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000775;7.99e-08;3!CL:0000094;7.01e-07;8 | |ontology_enrichment_celltype_v019=CL:0000775;7.99e-08;3!CL:0000094;7.01e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,6.51e-08,3;CL:0000094,6.00e-07,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.31e-15!115;UBERON:0001049!1.87e-11!57;UBERON:0005068!1.87e-11!57;UBERON:0006241!1.87e-11!57;UBERON:0007135!1.87e-11!57;UBERON:0003080!1.32e-10!42;UBERON:0002780!3.96e-10!41;UBERON:0001890!3.96e-10!41;UBERON:0006240!3.96e-10!41;UBERON:0002616!1.90e-09!59;UBERON:0000955!4.82e-09!69;UBERON:0006238!4.82e-09!69;UBERON:0001017!7.46e-09!82;UBERON:0002020!1.66e-08!34;UBERON:0003528!1.66e-08!34;UBERON:0005743!4.26e-08!86;UBERON:0000073!6.59e-08!94;UBERON:0001016!6.59e-08!94;UBERON:0002791!1.63e-07!33;UBERON:0001893!2.36e-07!34;UBERON:0001869!4.93e-07!32;UBERON:0002619!5.87e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!1.31e-15!115;UBERON:0001049!1.87e-11!57;UBERON:0005068!1.87e-11!57;UBERON:0006241!1.87e-11!57;UBERON:0007135!1.87e-11!57;UBERON:0003080!1.32e-10!42;UBERON:0002780!3.96e-10!41;UBERON:0001890!3.96e-10!41;UBERON:0006240!3.96e-10!41;UBERON:0002616!1.90e-09!59;UBERON:0000955!4.82e-09!69;UBERON:0006238!4.82e-09!69;UBERON:0001017!7.46e-09!82;UBERON:0002020!1.66e-08!34;UBERON:0003528!1.66e-08!34;UBERON:0005743!4.26e-08!86;UBERON:0000073!6.59e-08!94;UBERON:0001016!6.59e-08!94;UBERON:0002791!1.63e-07!33;UBERON:0001893!2.36e-07!34;UBERON:0001869!4.93e-07!32;UBERON:0002619!5.87e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.14e-13;22!UBERON:0001950;7.53e-13;20!UBERON:0003528;1.14e-12;34!UBERON:0002020;1.14e-12;34!UBERON:0002791;9.15e-12;32!UBERON:0001869;9.69e-12;32!UBERON:0000956;1.10e-11;25!UBERON:0000203;1.10e-11;25!UBERON:0002780;3.28e-11;41!UBERON:0001890;3.28e-11;41!UBERON:0000073;8.61e-11;53!UBERON:0002616;8.61e-11;53!UBERON:0001893;2.73e-10;34!UBERON:0002021;2.94e-07;5!UBERON:0001017;3.91e-07;75!UBERON:0001016;4.09e-07;83 | |ontology_enrichment_uberon_v019=UBERON:0002619;1.14e-13;22!UBERON:0001950;7.53e-13;20!UBERON:0003528;1.14e-12;34!UBERON:0002020;1.14e-12;34!UBERON:0002791;9.15e-12;32!UBERON:0001869;9.69e-12;32!UBERON:0000956;1.10e-11;25!UBERON:0000203;1.10e-11;25!UBERON:0002780;3.28e-11;41!UBERON:0001890;3.28e-11;41!UBERON:0000073;8.61e-11;53!UBERON:0002616;8.61e-11;53!UBERON:0001893;2.73e-10;34!UBERON:0002021;2.94e-07;5!UBERON:0001017;3.91e-07;75!UBERON:0001016;4.09e-07;83 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.02e-22,56;UBERON:0005068,3.02e-22,56;UBERON:0006241,3.02e-22,56;UBERON:0007135,3.02e-22,56;UBERON:0000073,1.29e-18,53;UBERON:0002616,1.29e-18,53;UBERON:0003075,1.60e-17,82;UBERON:0007284,1.60e-17,82;UBERON:0002346,2.74e-16,86;UBERON:0003528,7.33e-16,34;UBERON:0002020,7.33e-16,34;UBERON:0002780,1.48e-15,41;UBERON:0001890,1.48e-15,41;UBERON:0003080,1.48e-15,41;UBERON:0006240,1.48e-15,41;UBERON:0001017,3.36e-15,81;UBERON:0007023,8.44e-15,114;UBERON:0000955,4.80e-14,68;UBERON:0006238,4.80e-14,68;UBERON:0001016,5.91e-14,89;UBERON:0002619,9.62e-14,22;UBERON:0002791,3.74e-13,32;UBERON:0001869,3.74e-13,32;UBERON:0010371,5.42e-13,104;UBERON:0001950,6.37e-13,20;UBERON:0001893,3.79e-12,34;UBERON:0000956,9.52e-12,25;UBERON:0000203,9.52e-12,25;UBERON:0010314,6.23e-10,132;UBERON:0003056,8.44e-10,61;UBERON:0003076,5.42e-08,15;UBERON:0003057,5.42e-08,15;UBERON:0002021,1.97e-07,5 | |||
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| ||
|short_description=p12@WAC | |short_description=p12@WAC | ||
}} | }} |
Latest revision as of 20:21, 17 September 2015
Short description: | p12@WAC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_WAC_5end |
Coexpression cluster: | C3011_Cardiac_Neutrophils_Smooth_parietal_occipital_middle_medial |
Association with transcript: | 31bp_to_ENST00000476046_5end |
EntrezGene: | WAC |
HGNC: | 17327 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 6.51e-08 | 3 |
granulocyte | 6.00e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.02e-22 | 56 |
neural rod | 3.02e-22 | 56 |
future spinal cord | 3.02e-22 | 56 |
neural keel | 3.02e-22 | 56 |
regional part of nervous system | 1.29e-18 | 53 |
regional part of brain | 1.29e-18 | 53 |
neural plate | 1.60e-17 | 82 |
presumptive neural plate | 1.60e-17 | 82 |
neurectoderm | 2.74e-16 | 86 |
brain grey matter | 7.33e-16 | 34 |
gray matter | 7.33e-16 | 34 |
regional part of forebrain | 1.48e-15 | 41 |
forebrain | 1.48e-15 | 41 |
anterior neural tube | 1.48e-15 | 41 |
future forebrain | 1.48e-15 | 41 |
central nervous system | 3.36e-15 | 81 |
adult organism | 8.44e-15 | 114 |
brain | 4.80e-14 | 68 |
future brain | 4.80e-14 | 68 |
nervous system | 5.91e-14 | 89 |
regional part of cerebral cortex | 9.62e-14 | 22 |
regional part of telencephalon | 3.74e-13 | 32 |
cerebral hemisphere | 3.74e-13 | 32 |
ecto-epithelium | 5.42e-13 | 104 |
neocortex | 6.37e-13 | 20 |
telencephalon | 3.79e-12 | 34 |
cerebral cortex | 9.52e-12 | 25 |
pallium | 9.52e-12 | 25 |
structure with developmental contribution from neural crest | 6.23e-10 | 132 |
pre-chordal neural plate | 8.44e-10 | 61 |
posterior neural tube | 5.42e-08 | 15 |
chordal neural plate | 5.42e-08 | 15 |
occipital lobe | 1.97e-07 | 5 |