FFCP PHASE1:Hg19::chr21:39870648..39870655,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:39870648..39870655,-
|short_description=p8@ERG
|description=CAGE_peak_8_at_ERG_5end
|association_with_transcript=-220bp_to_NM_001136155,NM_182918,uc002yxa...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2078 | |EntrezGene=2078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3446 | |HGNC=3446 | ||
|TSSclassifier=strong | |||
|UniProt=P11308 | |UniProt=P11308 | ||
|association_with_transcript=-220bp_to_NM_001136155,NM_182918,uc002yxa.2,uc011aek.1,uc011aem.1_5end | |||
|cluster_id=chr21:39870648..39870655,- | |||
|coexpression_cluster_id=C96 | |||
|description=CAGE_peak_8_at_ERG_5end | |||
|id=chr21:39870648..39870655,- | |||
|ontology_enrichment_celltype=CL:0000071!4.41e-12!18;CL:0002546!4.41e-12!18;CL:0002618!7.45e-12!3;CL:0002139!4.42e-11!24;CL:0002543!4.64e-10!6;CL:0000115!6.83e-09!35;CL:1000413!6.21e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000817;1.08e-19;1!CL:0000037;1.71e-19;1!CL:0001024;1.71e-19;1!CL:0002262;2.85e-10;2!CL:1000398;2.85e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,1.56e-19,1;CL:0002262,2.49e-10,2;CL:1000398,2.49e-10,2;CL:0000817,1.93e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.06e-10!31;DOID:1240!5.96e-10!39;DOID:2531!4.41e-07!51;DOID:0060083!4.41e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.79e-20;31!DOID:1240;2.57e-19;39!DOID:9119;3.56e-19;1!DOID:2531;3.09e-14;51!DOID:0060083;3.09e-14;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.60e-22,39;DOID:8692,9.98e-21,31;DOID:9119,3.25e-19,1;DOID:2531,5.20e-17,51;DOID:0060083,5.20e-17,51 | |||
|ontology_enrichment_uberon=UBERON:0001986!4.41e-12!18;UBERON:0004638!4.41e-12!18;UBERON:0004852!4.41e-12!18;UBERON:0001638!4.90e-10!9;UBERON:0003920!4.90e-10!9;UBERON:0004582!4.90e-10!9;UBERON:0000487!1.20e-09!22;UBERON:0001954!1.60e-08!2;UBERON:0003022!1.60e-08!2;UBERON:0002421!1.60e-08!2;UBERON:0002600!1.60e-08!2;UBERON:0006914!2.47e-08!25;UBERON:0002066!2.78e-07!5;UBERON:0003915!6.21e-07!9;UBERON:0004700!6.21e-07!9;UBERON:0001917!6.21e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.85e-10;2!UBERON:0003497;2.85e-10;2!UBERON:0003909;2.85e-10;2!UBERON:0003835;2.85e-10;2!UBERON:0001280;2.88e-07;3!UBERON:0004647;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.49e-10,2;UBERON:0003497,2.49e-10,2;UBERON:0003909,2.49e-10,2;UBERON:0003835,2.49e-10,2;UBERON:0001280,2.63e-07,3;UBERON:0004647,2.63e-07,3;UBERON:0005171,2.63e-07,3 | |||
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| ||
|short_description=p8@ERG | |||
}} | }} |
Latest revision as of 10:29, 18 September 2015
Short description: | p8@ERG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ERG_5end |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | -220bp_to_NM_001136155, NM_182918, uc002yxa.2, uc011aek.1, uc011aem.1_5end |
EntrezGene: | ERG |
HGNC: | 3446 |
UniProt: | P11308 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 1.56e-19 | 1 |
endothelial cell of sinusoid | 2.49e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.49e-10 | 2 |
precursor B cell | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.49e-10 | 2 |
abdomen blood vessel | 2.49e-10 | 2 |
sinusoid | 2.49e-10 | 2 |
abdominal segment blood vessel | 2.49e-10 | 2 |
liver parenchyma | 2.63e-07 | 3 |
liver lobule | 2.63e-07 | 3 |
hepatic duct | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.60e-22 | 39 |
myeloid leukemia | 9.98e-21 | 31 |
acute myeloid leukemia | 3.25e-19 | 1 |
hematologic cancer | 5.20e-17 | 51 |
immune system cancer | 5.20e-17 | 51 |