FFCP PHASE1:Hg19::chr13:76363052..76363077,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |EntrezGene=4008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |HGNC=6646 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLU6 | |UniProt=E9PLU6 | ||
|association_with_transcript=78bp_to_ENST00000497947_5end | |association_with_transcript=78bp_to_ENST00000497947_5end | ||
|cluster_id=chr13:76363052..76363077,+ | |||
|coexpression_cluster_id=C1190 | |coexpression_cluster_id=C1190 | ||
|description=CAGE_peak_7_at_LMO7_5end | |description=CAGE_peak_7_at_LMO7_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000188!3.00e-10!9;CL:0002620!5.07e-09!23 | |ontology_enrichment_celltype=CL:0000188!3.00e-10!9;CL:0002620!5.07e-09!23 | ||
|ontology_enrichment_celltype_v019=CL:0000188;8.63e-14;9!CL:0000680;5.39e-13;7!CL:0000056;1.01e-10;4!CL:0000515;2.19e-08;3 | |ontology_enrichment_celltype_v019=CL:0000188;8.63e-14;9!CL:0000680;5.39e-13;7!CL:0000056;1.01e-10;4!CL:0000515;2.19e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000188,9.26e-14,9;CL:0000515,1.17e-10,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.01e-10;4!UBERON:0008947;8.27e-09;29 | |ontology_enrichment_development_v019=CL:0000515;1.01e-10;4!UBERON:0008947;8.27e-09;29 | ||
|ontology_enrichment_disease=DOID:305!7.94e-08!106 | |ontology_enrichment_disease=DOID:305!7.94e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.92e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.52e-11!9;UBERON:0003104!1.31e-08!238;UBERON:0009142!1.31e-08!238;UBERON:0001007!5.44e-07!155;UBERON:0001555!5.44e-07!155;UBERON:0007026!5.44e-07!155;UBERON:0001557!5.69e-07!19;UBERON:0004119!7.92e-07!169;UBERON:0000925!7.92e-07!169;UBERON:0006595!7.92e-07!169 | |ontology_enrichment_uberon=UBERON:0001737!1.52e-11!9;UBERON:0003104!1.31e-08!238;UBERON:0009142!1.31e-08!238;UBERON:0001007!5.44e-07!155;UBERON:0001555!5.44e-07!155;UBERON:0007026!5.44e-07!155;UBERON:0001557!5.69e-07!19;UBERON:0004119!7.92e-07!169;UBERON:0000925!7.92e-07!169;UBERON:0006595!7.92e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.31e-24;16!UBERON:0002036;1.31e-24;16!UBERON:0001737;1.24e-23;9!UBERON:0001557;1.24e-23;9!UBERON:0002385;5.52e-11;31!UBERON:0001015;5.52e-11;31!UBERON:0000383;5.52e-11;31 | |ontology_enrichment_uberon_v019=UBERON:0001134;1.31e-24;16!UBERON:0002036;1.31e-24;16!UBERON:0001737;1.24e-23;9!UBERON:0001557;1.24e-23;9!UBERON:0002385;5.52e-11;31!UBERON:0001015;5.52e-11;31!UBERON:0000383;5.52e-11;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.30e-23,9;UBERON:0001557,7.83e-15,19 | |||
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| ||
|short_description=p7@LMO7 | |short_description=p7@LMO7 | ||
}} | }} |
Latest revision as of 00:15, 18 September 2015
Short description: | p7@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LMO7_5end |
Coexpression cluster: | C1190_Skeletal_rhabdomyosarcoma_mesenchymal_giant_mucinous_skeletal_Hep2 |
Association with transcript: | 78bp_to_ENST00000497947_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PLU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 9.26e-14 | 9 |
skeletal muscle myoblast | 1.17e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.30e-23 | 9 |
upper respiratory tract | 7.83e-15 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.92e-08 | 106 |