FFCP PHASE1:Hg19::chr1:153600869..153600926,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6271 | |EntrezGene=6271 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10486 | |HGNC=10486 | ||
|TSSclassifier=strong | |||
|UniProt=P23297,Q5T7Y4,B2R5D9 | |UniProt=P23297,Q5T7Y4,B2R5D9 | ||
|association_with_transcript=0bp_to_ENST00000292169,ENST00000368696,NM_006271,uc001fck.1,uc001fcl.1_5end | |association_with_transcript=0bp_to_ENST00000292169,ENST00000368696,NM_006271,uc001fck.1,uc001fcl.1_5end | ||
|cluster_id=chr1:153600869..153600926,+ | |||
|coexpression_cluster_id=C2528 | |coexpression_cluster_id=C2528 | ||
|description=CAGE_peak_1_at_S100A1_5end | |description=CAGE_peak_1_at_S100A1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.32e-07;10 | |ontology_enrichment_celltype_v019=CL:0000148;2.32e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.41e-07,10;CL:0000541,2.41e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.36e-12;82 | |ontology_enrichment_development_v019=UBERON:0006601;1.36e-12;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;5.23e-18;53!UBERON:0002616;5.23e-18;53!UBERON:0002780;9.01e-18;41!UBERON:0001890;9.01e-18;41!UBERON:0001893;6.19e-17;34!UBERON:0003528;8.31e-17;34!UBERON:0002020;8.31e-17;34!UBERON:0002791;1.97e-16;32!UBERON:0001869;2.36e-16;32!UBERON:0002619;4.66e-16;22!UBERON:0007023;8.93e-15;114!UBERON:0001950;1.44e-14;20!UBERON:0000956;4.43e-13;25!UBERON:0000203;4.43e-13;25!UBERON:0000955;2.85e-12;68!UBERON:0001017;7.96e-12;75!UBERON:0001016;2.02e-10;83!UBERON:0004732;1.59e-09;13!UBERON:0004733;8.48e-09;12!UBERON:0002028;8.48e-09;12!UBERON:0000125;1.19e-08;9!UBERON:0002308;1.19e-08;9!UBERON:0002420;1.61e-08;9!UBERON:0007245;1.61e-08;9!UBERON:0010009;1.61e-08;9!UBERON:0010011;1.61e-08;9!UBERON:0000454;1.61e-08;9!UBERON:0009663;5.85e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000073;5.23e-18;53!UBERON:0002616;5.23e-18;53!UBERON:0002780;9.01e-18;41!UBERON:0001890;9.01e-18;41!UBERON:0001893;6.19e-17;34!UBERON:0003528;8.31e-17;34!UBERON:0002020;8.31e-17;34!UBERON:0002791;1.97e-16;32!UBERON:0001869;2.36e-16;32!UBERON:0002619;4.66e-16;22!UBERON:0007023;8.93e-15;114!UBERON:0001950;1.44e-14;20!UBERON:0000956;4.43e-13;25!UBERON:0000203;4.43e-13;25!UBERON:0000955;2.85e-12;68!UBERON:0001017;7.96e-12;75!UBERON:0001016;2.02e-10;83!UBERON:0004732;1.59e-09;13!UBERON:0004733;8.48e-09;12!UBERON:0002028;8.48e-09;12!UBERON:0000125;1.19e-08;9!UBERON:0002308;1.19e-08;9!UBERON:0002420;1.61e-08;9!UBERON:0007245;1.61e-08;9!UBERON:0010009;1.61e-08;9!UBERON:0010011;1.61e-08;9!UBERON:0000454;1.61e-08;9!UBERON:0009663;5.85e-07;7 | ||
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| ||
|short_description=p1@S100A1 | |short_description=p1@S100A1 | ||
}} | }} |
Latest revision as of 06:50, 17 September 2015
Short description: | p1@S100A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_S100A1_5end |
Coexpression cluster: | C2528_left_heart_skeletal_salivary_parotid_melanoma_tongue |
Association with transcript: | 0bp_to_ENST00000292169, ENST00000368696, NM_006271, uc001fck.1, uc001fcl.1_5end |
EntrezGene: | S100A1 |
HGNC: | 10486 |
UniProt: | P23297Q5T7Y4B2R5D9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.41e-07 | 10 |
melanoblast | 2.41e-07 | 10 |