FFCP PHASE1:Hg19::chr11:58553691..58553697,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:58553691..58553697,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_at_chr11:58553691..58553697,+ | |description=CAGE_peak_at_chr11:58553691..58553697,+ | ||
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|ontology_enrichment_celltype=CL:0000842!1.34e-11!3;CL:0000080!6.42e-10!6;CL:0000224!8.56e-09!4;CL:0000081!4.57e-08!11;CL:0000764!9.55e-08!2;CL:0000765!9.55e-08!2;CL:0000050!9.55e-08!2;CL:0000038!9.55e-08!2;CL:0000558!9.55e-08!2;CL:0000547!9.55e-08!2;CL:0000549!9.55e-08!2;CL:0000550!9.55e-08!2;CL:0000552!9.55e-08!2;CL:0000094!1.85e-07!8 | |ontology_enrichment_celltype=CL:0000842!1.34e-11!3;CL:0000080!6.42e-10!6;CL:0000224!8.56e-09!4;CL:0000081!4.57e-08!11;CL:0000764!9.55e-08!2;CL:0000765!9.55e-08!2;CL:0000050!9.55e-08!2;CL:0000038!9.55e-08!2;CL:0000558!9.55e-08!2;CL:0000547!9.55e-08!2;CL:0000549!9.55e-08!2;CL:0000550!9.55e-08!2;CL:0000552!9.55e-08!2;CL:0000094!1.85e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000226;2.83e-17;3!CL:0000842;2.83e-17;3!CL:0000771;1.54e-07;2!CL:0000094;4.48e-07;8 | |ontology_enrichment_celltype_v019=CL:0000226;2.83e-17;3!CL:0000842;2.83e-17;3!CL:0000771;1.54e-07;2!CL:0000094;4.48e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000226,3.20e-17,3;CL:0000842,3.20e-17,3;CL:0000771,1.54e-07,2;CL:0000094,4.41e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.10e-13;1 | |ontology_enrichment_development_v019=UBERON:0005425;1.10e-13;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.98e-39!15;UBERON:0000179!1.98e-39!15;UBERON:0000463!1.98e-39!15;UBERON:0002390!7.41e-08!102;UBERON:0003061!7.41e-08!102;UBERON:0007023!3.86e-07!115;UBERON:0002193!8.83e-07!112 | |ontology_enrichment_uberon=UBERON:0000178!1.98e-39!15;UBERON:0000179!1.98e-39!15;UBERON:0000463!1.98e-39!15;UBERON:0002390!7.41e-08!102;UBERON:0003061!7.41e-08!102;UBERON:0007023!3.86e-07!115;UBERON:0002193!8.83e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.42e-99;15!UBERON:0000179;4.42e-99;15!UBERON:0000463;4.42e-99;15!UBERON:0002390;4.08e-43;32!UBERON:0002193;1.48e-24;42!UBERON:0000941;1.10e-13;1!UBERON:0001785;1.10e-13;1!UBERON:0002464;1.10e-13;1!UBERON:0004904;1.10e-13;1!UBERON:0001021;1.10e-13;1!UBERON:0003714;1.75e-07;2!UBERON:0005162;1.75e-07;2!UBERON:0000122;1.75e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.42e-99;15!UBERON:0000179;4.42e-99;15!UBERON:0000463;4.42e-99;15!UBERON:0002390;4.08e-43;32!UBERON:0002193;1.48e-24;42!UBERON:0000941;1.10e-13;1!UBERON:0001785;1.10e-13;1!UBERON:0002464;1.10e-13;1!UBERON:0004904;1.10e-13;1!UBERON:0001021;1.10e-13;1!UBERON:0003714;1.75e-07;2!UBERON:0005162;1.75e-07;2!UBERON:0000122;1.75e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.58e-99,15;UBERON:0000179,5.58e-99,15;UBERON:0000463,5.58e-99,15;UBERON:0002390,5.83e-14,98;UBERON:0003061,5.83e-14,98;UBERON:0000941,9.73e-14,1;UBERON:0001785,9.73e-14,1;UBERON:0002464,9.73e-14,1;UBERON:0004904,9.73e-14,1;UBERON:0001021,9.73e-14,1;UBERON:0003902,9.73e-14,1;UBERON:0005425,9.73e-14,1;UBERON:0004535,1.49e-12,109;UBERON:0002193,1.49e-12,108;UBERON:0001009,3.52e-12,112;UBERON:0007023,7.78e-10,114;UBERON:0003714,1.64e-07,2;UBERON:0005162,1.64e-07,2;UBERON:0000122,1.64e-07,2 | |||
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| ||
|short_description=p@chr11:58553691..58553697,+ | |short_description=p@chr11:58553691..58553697,+ | ||
}} | }} |
Latest revision as of 23:06, 23 July 2015
Short description: | p@chr11:58553691..58553697, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:58553691..58553697, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
single nucleate cell | 3.20e-17 | 3 |
mononuclear cell | 3.20e-17 | 3 |
eosinophil | 1.54e-07 | 2 |
granulocyte | 4.41e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 5.58e-99 | 15 |
haemolymphatic fluid | 5.58e-99 | 15 |
organism substance | 5.58e-99 | 15 |
hematopoietic system | 5.83e-14 | 98 |
blood island | 5.83e-14 | 98 |
cranial nerve II | 9.73e-14 | 1 |
cranial nerve | 9.73e-14 | 1 |
nerve trunk | 9.73e-14 | 1 |
nerve connecting eye with brain | 9.73e-14 | 1 |
nerve | 9.73e-14 | 1 |
retinal neural layer | 9.73e-14 | 1 |
presumptive neural retina | 9.73e-14 | 1 |
cardiovascular system | 1.49e-12 | 109 |
hemolymphoid system | 1.49e-12 | 108 |
circulatory system | 3.52e-12 | 112 |
adult organism | 7.78e-10 | 114 |
neural tissue | 1.64e-07 | 2 |
multi cell component structure | 1.64e-07 | 2 |
neuron projection bundle | 1.64e-07 | 2 |