FFCP PHASE1:Hg19::chr12:54645913..54645928,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23468 | |EntrezGene=23468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1555 | |HGNC=1555 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=380bp_to_ENST00000547872_5end | |association_with_transcript=380bp_to_ENST00000547872_5end | ||
|cluster_id=chr12:54645913..54645928,- | |||
|description=CAGE_peak_3_at_CBX5_5end | |description=CAGE_peak_3_at_CBX5_5end | ||
|id=chr12:54645913..54645928,- | |id=chr12:54645913..54645928,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!2.88e-10!235;DOID:14566!3.86e-10!239 | |ontology_enrichment_disease=DOID:162!2.88e-10!235;DOID:14566!3.86e-10!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.21e-09!82;UBERON:0005743!7.38e-09!86;UBERON:0001049!3.87e-08!57;UBERON:0005068!3.87e-08!57;UBERON:0006241!3.87e-08!57;UBERON:0007135!3.87e-08!57;UBERON:0000073!7.00e-08!94;UBERON:0001016!7.00e-08!94;UBERON:0002346!2.21e-07!90;UBERON:0003075!5.64e-07!86;UBERON:0007284!5.64e-07!86;UBERON:0000955!5.83e-07!69;UBERON:0006238!5.83e-07!69;UBERON:0002616!6.95e-07!59 | |ontology_enrichment_uberon=UBERON:0001017!2.21e-09!82;UBERON:0005743!7.38e-09!86;UBERON:0001049!3.87e-08!57;UBERON:0005068!3.87e-08!57;UBERON:0006241!3.87e-08!57;UBERON:0007135!3.87e-08!57;UBERON:0000073!7.00e-08!94;UBERON:0001016!7.00e-08!94;UBERON:0002346!2.21e-07!90;UBERON:0003075!5.64e-07!86;UBERON:0007284!5.64e-07!86;UBERON:0000955!5.83e-07!69;UBERON:0006238!5.83e-07!69;UBERON:0002616!6.95e-07!59 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.62e-09,81;UBERON:0001049,1.06e-08,56;UBERON:0005068,1.06e-08,56;UBERON:0006241,1.06e-08,56;UBERON:0007135,1.06e-08,56;UBERON:0003528,9.02e-08,34;UBERON:0002020,9.02e-08,34;UBERON:0000073,1.13e-07,53;UBERON:0002616,1.13e-07,53;UBERON:0001016,1.37e-07,89;UBERON:0002346,1.50e-07,86;UBERON:0003075,7.57e-07,82;UBERON:0007284,7.57e-07,82;UBERON:0002791,8.57e-07,32 | |||
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| ||
|short_description=p3@CBX5 | |short_description=p3@CBX5 | ||
}} | }} |
Latest revision as of 05:26, 19 September 2015
Short description: | p3@CBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CBX5_5end |
Coexpression cluster: | NA |
Association with transcript: | 380bp_to_ENST00000547872_5end |
EntrezGene: | CBX5 |
HGNC: | 1555 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.62e-09 | 81 |
neural tube | 1.06e-08 | 56 |
neural rod | 1.06e-08 | 56 |
future spinal cord | 1.06e-08 | 56 |
neural keel | 1.06e-08 | 56 |
brain grey matter | 9.02e-08 | 34 |
gray matter | 9.02e-08 | 34 |
regional part of nervous system | 1.13e-07 | 53 |
regional part of brain | 1.13e-07 | 53 |
nervous system | 1.37e-07 | 89 |
neurectoderm | 1.50e-07 | 86 |
neural plate | 7.57e-07 | 82 |
presumptive neural plate | 7.57e-07 | 82 |
regional part of telencephalon | 8.57e-07 | 32 |