FFCP PHASE1:Hg19::chr13:79980315..79980403,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64062 | |EntrezGene=64062 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20327 | |HGNC=20327 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000438737_5end | |association_with_transcript=0bp_to_ENST00000438737_5end | ||
|cluster_id=chr13:79980315..79980403,- | |||
|description=CAGE_peak_1_at_RBM26_5end | |description=CAGE_peak_1_at_RBM26_5end | ||
|id=chr13:79980315..79980403,- | |id=chr13:79980315..79980403,- | ||
|ontology_enrichment_celltype=CL:0000542!3.43e-12!53;CL:0000051!3.43e-12!53;CL:0000838!9.16e-12!52;CL:0000945!2.08e-09!24;CL:0000826!2.08e-09!24 | |ontology_enrichment_celltype=CL:0000542!3.43e-12!53;CL:0000051!3.43e-12!53;CL:0000838!9.16e-12!52;CL:0000945!2.08e-09!24;CL:0000826!2.08e-09!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.65e-09;24!CL:0000542;4.39e-07;53 | |ontology_enrichment_celltype_v019=CL:0000945;1.65e-09;24!CL:0000542;4.39e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.43e-12,53;CL:0000051,3.43e-12,53;CL:0000838,9.16e-12,52;CL:0000945,2.08e-09,24;CL:0000826,2.08e-09,24 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.06e-08;82!CL:0000051;4.39e-07;53 | |ontology_enrichment_development_v019=UBERON:0006601;1.06e-08;82!CL:0000051;4.39e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.64e-25!115;UBERON:0000073!5.85e-24!94;UBERON:0001016!5.85e-24!94;UBERON:0001017!5.25e-23!82;UBERON:0005743!6.04e-22!86;UBERON:0001049!2.09e-21!57;UBERON:0005068!2.09e-21!57;UBERON:0006241!2.09e-21!57;UBERON:0007135!2.09e-21!57;UBERON:0002780!2.17e-19!41;UBERON:0001890!2.17e-19!41;UBERON:0006240!2.17e-19!41;UBERON:0003080!3.91e-19!42;UBERON:0000955!7.69e-19!69;UBERON:0006238!7.69e-19!69;UBERON:0002616!7.19e-18!59;UBERON:0001893!3.75e-16!34;UBERON:0002020!6.71e-16!34;UBERON:0003528!6.71e-16!34;UBERON:0002791!1.15e-15!33;UBERON:0001869!3.66e-15!32;UBERON:0002346!1.96e-14!90;UBERON:0003075!1.17e-13!86;UBERON:0007284!1.17e-13!86;UBERON:0000924!2.59e-12!173;UBERON:0006601!2.59e-12!173;UBERON:0000956!4.23e-12!25;UBERON:0000203!4.23e-12!25;UBERON:0002619!1.23e-11!22;UBERON:0004121!1.29e-11!169;UBERON:0000153!4.35e-11!129;UBERON:0007811!4.35e-11!129;UBERON:0001950!4.58e-11!20;UBERON:0003056!5.51e-11!61;UBERON:0000033!7.12e-10!123 | |ontology_enrichment_uberon=UBERON:0007023!3.64e-25!115;UBERON:0000073!5.85e-24!94;UBERON:0001016!5.85e-24!94;UBERON:0001017!5.25e-23!82;UBERON:0005743!6.04e-22!86;UBERON:0001049!2.09e-21!57;UBERON:0005068!2.09e-21!57;UBERON:0006241!2.09e-21!57;UBERON:0007135!2.09e-21!57;UBERON:0002780!2.17e-19!41;UBERON:0001890!2.17e-19!41;UBERON:0006240!2.17e-19!41;UBERON:0003080!3.91e-19!42;UBERON:0000955!7.69e-19!69;UBERON:0006238!7.69e-19!69;UBERON:0002616!7.19e-18!59;UBERON:0001893!3.75e-16!34;UBERON:0002020!6.71e-16!34;UBERON:0003528!6.71e-16!34;UBERON:0002791!1.15e-15!33;UBERON:0001869!3.66e-15!32;UBERON:0002346!1.96e-14!90;UBERON:0003075!1.17e-13!86;UBERON:0007284!1.17e-13!86;UBERON:0000924!2.59e-12!173;UBERON:0006601!2.59e-12!173;UBERON:0000956!4.23e-12!25;UBERON:0000203!4.23e-12!25;UBERON:0002619!1.23e-11!22;UBERON:0004121!1.29e-11!169;UBERON:0000153!4.35e-11!129;UBERON:0007811!4.35e-11!129;UBERON:0001950!4.58e-11!20;UBERON:0003056!5.51e-11!61;UBERON:0000033!7.12e-10!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.78e-14;41!UBERON:0001890;2.78e-14;41!UBERON:0002791;5.37e-14;32!UBERON:0001869;7.65e-14;32!UBERON:0001893;8.09e-14;34!UBERON:0003528;1.10e-13;34!UBERON:0002020;1.10e-13;34!UBERON:0000073;1.07e-12;53!UBERON:0002616;1.07e-12;53!UBERON:0000956;3.44e-12;25!UBERON:0000203;3.44e-12;25!UBERON:0002619;1.05e-11;22!UBERON:0001950;4.27e-11;20!UBERON:0001016;9.42e-10;83!UBERON:0001017;1.71e-09;75!UBERON:0000955;5.38e-09;68!UBERON:0007023;5.05e-08;114 | |ontology_enrichment_uberon_v019=UBERON:0002780;2.78e-14;41!UBERON:0001890;2.78e-14;41!UBERON:0002791;5.37e-14;32!UBERON:0001869;7.65e-14;32!UBERON:0001893;8.09e-14;34!UBERON:0003528;1.10e-13;34!UBERON:0002020;1.10e-13;34!UBERON:0000073;1.07e-12;53!UBERON:0002616;1.07e-12;53!UBERON:0000956;3.44e-12;25!UBERON:0000203;3.44e-12;25!UBERON:0002619;1.05e-11;22!UBERON:0001950;4.27e-11;20!UBERON:0001016;9.42e-10;83!UBERON:0001017;1.71e-09;75!UBERON:0000955;5.38e-09;68!UBERON:0007023;5.05e-08;114 | ||
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| ||
|short_description=p1@RBM26 | |short_description=p1@RBM26 | ||
}} | }} |
Latest revision as of 02:21, 18 September 2015
Short description: | p1@RBM26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RBM26_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000438737_5end |
EntrezGene: | RBM26 |
HGNC: | 20327 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.43e-12 | 53 |
common lymphoid progenitor | 3.43e-12 | 53 |
lymphoid lineage restricted progenitor cell | 9.16e-12 | 52 |
lymphocyte of B lineage | 2.08e-09 | 24 |
pro-B cell | 2.08e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.08e-25 | 89 |
adult organism | 1.22e-24 | 114 |
central nervous system | 3.99e-23 | 81 |
neural tube | 1.34e-21 | 56 |
neural rod | 1.34e-21 | 56 |
future spinal cord | 1.34e-21 | 56 |
neural keel | 1.34e-21 | 56 |
regional part of nervous system | 1.72e-20 | 53 |
regional part of brain | 1.72e-20 | 53 |
regional part of forebrain | 2.17e-19 | 41 |
forebrain | 2.17e-19 | 41 |
anterior neural tube | 2.17e-19 | 41 |
future forebrain | 2.17e-19 | 41 |
brain | 5.89e-19 | 68 |
future brain | 5.89e-19 | 68 |
telencephalon | 3.75e-16 | 34 |
brain grey matter | 6.71e-16 | 34 |
gray matter | 6.71e-16 | 34 |
regional part of telencephalon | 3.41e-15 | 32 |
cerebral hemisphere | 3.66e-15 | 32 |
neurectoderm | 3.51e-14 | 86 |
neural plate | 2.09e-13 | 82 |
presumptive neural plate | 2.09e-13 | 82 |
cerebral cortex | 4.23e-12 | 25 |
pallium | 4.23e-12 | 25 |
organ system subdivision | 8.86e-12 | 223 |
ectoderm-derived structure | 1.07e-11 | 171 |
ectoderm | 1.07e-11 | 171 |
presumptive ectoderm | 1.07e-11 | 171 |
regional part of cerebral cortex | 1.23e-11 | 22 |
pre-chordal neural plate | 2.46e-11 | 61 |
neocortex | 4.58e-11 | 20 |
ecto-epithelium | 6.46e-08 | 104 |