FFCP PHASE1:Hg19::chr21:35893878..35893912,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:35893878..35893912,-
|short_description=p10@RCAN1
|description=CAGE_peak_10_at_RCAN1_5end
|association_with_transcript=0bp_to_ENST00000487434_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1827 | |EntrezGene=1827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3040 | |HGNC=3040 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000487434_5end | |||
|cluster_id=chr21:35893878..35893912,- | |||
|description=CAGE_peak_10_at_RCAN1_5end | |||
|id=chr21:35893878..35893912,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002579;2.69e-38;3!CL:0002334;6.09e-26;12!CL:0000153;3.73e-22;9!CL:0000447;3.73e-22;9!CL:0000138;4.36e-19;6!CL:0002581;1.10e-13;1!CL:0000327;2.00e-13;15!CL:0000499;2.68e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,5.08e-38,3;CL:0002334,5.50e-26,12;CL:0000153,3.95e-22,9;CL:0000447,3.95e-22,9;CL:0000058,4.95e-19,6;CL:0000138,4.95e-19,6;CL:0002581,8.58e-14,1;CL:0000327,2.07e-13,15;CL:0000499,2.73e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.07e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.25e-26,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;9.29e-35;9!UBERON:0000042;9.29e-35;9!UBERON:0003688;7.45e-34;6!UBERON:0002358;7.45e-34;6!UBERON:0003684;7.45e-34;6!UBERON:0001178;7.45e-34;6!UBERON:0005406;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.14e-33,6;UBERON:0002358,1.14e-33,6;UBERON:0003684,1.14e-33,6;UBERON:0001178,1.14e-33,6;UBERON:0004457,5.23e-26,12;UBERON:0000042,5.23e-26,12;UBERON:0005406,1.54e-07,2 | |||
|phase1_expression=0.363356758541113,0.214100523890983,2.39622486963151,0,0.893922188854576,0.872338524100369,0,0.631719873426831,0,0,0.697801167972428,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,1.59331170856906,0,1.45990461090791,0.0945348171640679,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0,0,0.709336764396714,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0.298897361103602,0.352303495931295,0.161872944368132,0,0,0,0,0,0.989067717114227,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0.427114777637135,0.211931901159562,0,0,0,0.18611685633159,0,0.389748020644795,0,0.184099797284599,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0.763976851116555,0,0,0.102827492703324,0.901029173531752,0.571652865261156,0.112131084345361,0,0.07333828582095,0,0,0.845302752556,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.599837947092342,0,0.502257091432126,0,0.718874566474748,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,1.98486246255021,0,0.280660094433074,5.38184426873944,1.02341449813341,2.2519548960105,1.48418066444991,0,0,0,0,0,0.362578348774867,0.40101294060657,0.276242966807689,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.183138929636687,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0,0.10115778085555,0.464845549297286,0.62962469366128,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.487426979262569,0,0.409499734223957,0.282810863907425,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0.354761064070598,1.47775344708365,0.658589785919804,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0.586032717087576,0,0,0.284136146806413,0,0,0,0.994147647766298,0,0,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,1.65471377237555,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0.641183153813036,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0.290967049465258,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0,0,0,0,0.558564802544508,0,0,0,0.429226048136571,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.196854963029498,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.551639951094387,0.0524545881349981,0.105600336519406,0,0.191915197319445,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0.879313402068495,0,0.258565912723101,0,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0.122026264901963,0,0,0,0,0,0.124980407962107,10.3121399928321,1.14186133417987,0,0,0,0,0,0,0.568209015825267,0,0,0,0.302461847526478,0.15543720058278,0,0.318593534327405,0.899606224327209,0.155262956876259,0,0.53168342911599,0.521745061811734,0.450772826991655,0,0,0,0.214821114084977,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0.438568099157414,0,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0.655219697692825,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0.82046545696302,0.504143392443436,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0.348724276104376,0,0,0.207216164163037,0,0,0,0,0.170426809518315,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0,0,0,0.701818390386317,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.84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|phase1_expression=0.363356758541113,0.214100523890983,2.39622486963151,0,0.893922188854576,0.872338524100369,0,0.631719873426831,0,0,0.697801167972428,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,1.59331170856906,0,1.45990461090791,0.0945348171640679,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0,0,0.709336764396714,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0.298897361103602,0.352303495931295,0.161872944368132,0,0,0,0,0,0.989067717114227,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0.427114777637135,0.211931901159562,0,0,0,0.18611685633159,0,0.389748020644795,0,0.184099797284599,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0.763976851116555,0,0,0.102827492703324,0.901029173531752,0.571652865261156,0.112131084345361,0,0.07333828582095,0,0,0.845302752556,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.599837947092342,0,0.502257091432126,0,0.718874566474748,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,1.98486246255021,0,0.280660094433074,5.38184426873944,1.02341449813341,2.2519548960105,1.48418066444991,0,0,0,0,0,0.362578348774867,0.40101294060657,0.276242966807689,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.183138929636687,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0,0.10115778085555,0.464845549297286,0.62962469366128,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.487426979262569,0,0.409499734223957,0.282810863907425,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0.354761064070598,1.47775344708365,0.658589785919804,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0.586032717087576,0,0,0.284136146806413,0,0,0,0.994147647766298,0,0,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,1.65471377237555,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0.641183153813036,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0.290967049465258,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0,0,0,0,0.558564802544508,0,0,0,0.429226048136571,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.196854963029498,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.551639951094387,0.0524545881349981,0.105600336519406,0,0.191915197319445,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0.879313402068495,0,0.258565912723101,0,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0.122026264901963,0,0,0,0,0,0.124980407962107,10.3121399928321,1.14186133417987,0,0,0,0,0,0,0.568209015825267,0,0,0,0.302461847526478,0.15543720058278,0,0.318593534327405,0.899606224327209,0.155262956876259,0,0.53168342911599,0.521745061811734,0.450772826991655,0,0,0,0.214821114084977,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0.438568099157414,0,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0.655219697692825,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0.82046545696302,0.504143392443436,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0.348724276104376,0,0,0.207216164163037,0,0,0,0,0.170426809518315,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0,0,0,0.701818390386317,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.84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| ||
|short_description=p10@RCAN1 | |||
}} | }} |
Latest revision as of 05:58, 18 September 2015
Short description: | p10@RCAN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RCAN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000487434_5end |
EntrezGene: | RCAN1 |
HGNC: | 3040 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 5.08e-38 | 3 |
preadipocyte | 5.50e-26 | 12 |
GAG secreting cell | 3.95e-22 | 9 |
carbohydrate secreting cell | 3.95e-22 | 9 |
chondroblast | 4.95e-19 | 6 |
chondrocyte | 4.95e-19 | 6 |
perirenal preadipocyte | 8.58e-14 | 1 |
extracellular matrix secreting cell | 2.07e-13 | 15 |
stromal cell | 2.73e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.14e-33 | 6 |
peritoneum | 1.14e-33 | 6 |
abdominal cavity | 1.14e-33 | 6 |
visceral peritoneum | 1.14e-33 | 6 |
cavity lining | 5.23e-26 | 12 |
serous membrane | 5.23e-26 | 12 |
perirenal fat | 1.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.25e-26 | 2 |