FFCP PHASE1:Hg19::chr21:35454368..35454370,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:35454368..35454370,+
|short_description=p@chr21:35454368..35454370,+
|description=CAGE_peak_at_chr21:35454368..35454370,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:35454368..35454370,+ | |||
|coexpression_cluster_id=C356 | |||
|description=CAGE_peak_at_chr21:35454368..35454370,+ | |||
|id=chr21:35454368..35454370,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.30e-08!140;CL:0002087!2.77e-08!119;CL:0000037!4.32e-08!172;CL:0000566!4.32e-08!172;CL:0002032!6.23e-08!165;CL:0000837!6.23e-08!165;CL:0000988!2.56e-07!182;CL:0002031!3.01e-07!124 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.00e-08!57;UBERON:0005068!5.00e-08!57;UBERON:0006241!5.00e-08!57;UBERON:0007135!5.00e-08!57;UBERON:0000955!7.47e-08!69;UBERON:0006238!7.47e-08!69;UBERON:0002616!2.47e-07!59;UBERON:0002020!2.95e-07!34;UBERON:0003528!2.95e-07!34;UBERON:0003080!3.86e-07!42;UBERON:0002780!6.06e-07!41;UBERON:0001890!6.06e-07!41;UBERON:0006240!6.06e-07!41;UBERON:0001017!9.23e-07!82;UBERON:0002791!9.37e-07!33;UBERON:0001893!9.86e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.18e-07,56;UBERON:0005068,4.18e-07,56;UBERON:0006241,4.18e-07,56;UBERON:0007135,4.18e-07,56;UBERON:0000955,5.13e-07,68;UBERON:0006238,5.13e-07,68;UBERON:0003528,6.79e-07,34;UBERON:0002020,6.79e-07,34;UBERON:0002780,8.11e-07,41;UBERON:0001890,8.11e-07,41;UBERON:0003080,8.11e-07,41;UBERON:0006240,8.11e-07,41;UBERON:0000073,8.62e-07,53;UBERON:0002616,8.62e-07,53;UBERON:0002791,8.83e-07,32 | |||
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| ||
|short_description=p@chr21:35454368..35454370,+ | |||
}} | }} |
Latest revision as of 17:31, 28 July 2015
Short description: | p@chr21:35454368..35454370, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:35454368..35454370, + |
Coexpression cluster: | C356_renal_Smooth_Chondrocyte_thyroid_serous_Small_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 4.18e-07 | 56 |
neural rod | 4.18e-07 | 56 |
future spinal cord | 4.18e-07 | 56 |
neural keel | 4.18e-07 | 56 |
brain | 5.13e-07 | 68 |
future brain | 5.13e-07 | 68 |
brain grey matter | 6.79e-07 | 34 |
gray matter | 6.79e-07 | 34 |
regional part of forebrain | 8.11e-07 | 41 |
forebrain | 8.11e-07 | 41 |
anterior neural tube | 8.11e-07 | 41 |
future forebrain | 8.11e-07 | 41 |
regional part of nervous system | 8.62e-07 | 53 |
regional part of brain | 8.62e-07 | 53 |
regional part of telencephalon | 8.83e-07 | 32 |