FFCP PHASE1:Hg19::chr21:35147022..35147035,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:35147022..35147035,+
|short_description=p5@ITSN1
|description=CAGE_peak_5_at_ITSN1_5end
|association_with_transcript=355bp_to_ENST00000474132_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6453 | |EntrezGene=6453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6183 | |HGNC=6183 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=355bp_to_ENST00000474132_5end | |||
|cluster_id=chr21:35147022..35147035,+ | |||
|description=CAGE_peak_5_at_ITSN1_5end | |||
|id=chr21:35147022..35147035,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000737;2.37e-07;4!CL:0002195;7.28e-07;2!CL:0002571;7.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000737,1.95e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.13e-14!69;UBERON:0006238!2.13e-14!69;UBERON:0001017!4.89e-14!82;UBERON:0005743!1.85e-13!86;UBERON:0001049!3.85e-13!57;UBERON:0005068!3.85e-13!57;UBERON:0006241!3.85e-13!57;UBERON:0007135!3.85e-13!57;UBERON:0002020!7.95e-13!34;UBERON:0003528!7.95e-13!34;UBERON:0000073!1.12e-12!94;UBERON:0001016!1.12e-12!94;UBERON:0001893!1.34e-12!34;UBERON:0002616!1.37e-12!59;UBERON:0002346!1.54e-12!90;UBERON:0002780!2.24e-12!41;UBERON:0001890!2.24e-12!41;UBERON:0006240!2.24e-12!41;UBERON:0002791!3.14e-12!33;UBERON:0001869!9.15e-12!32;UBERON:0003080!1.04e-11!42;UBERON:0003075!1.44e-11!86;UBERON:0007284!1.44e-11!86;UBERON:0000924!1.58e-11!173;UBERON:0006601!1.58e-11!173;UBERON:0000033!2.04e-11!123;UBERON:0000153!5.03e-11!129;UBERON:0007811!5.03e-11!129;UBERON:0004121!1.09e-10!169;UBERON:0000956!1.06e-09!25;UBERON:0000203!1.06e-09!25;UBERON:0003056!1.41e-09!61;UBERON:0002619!1.05e-08!22;UBERON:0001950!1.28e-07!20;UBERON:0007023!3.08e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.03e-13;32!UBERON:0000956;6.95e-13;25!UBERON:0000203;6.95e-13;25!UBERON:0002619;1.73e-12;22!UBERON:0003528;2.23e-12;34!UBERON:0002020;2.23e-12;34!UBERON:0001893;5.04e-12;34!UBERON:0001869;9.49e-12;32!UBERON:0001950;1.80e-11;20!UBERON:0002780;7.14e-10;41!UBERON:0001890;7.14e-10;41!UBERON:0000073;3.80e-08;53!UBERON:0002616;3.80e-08;53!UBERON:0002771;6.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,5.53e-16,32;UBERON:0003528,7.50e-15,34;UBERON:0002020,7.50e-15,34;UBERON:0001893,7.50e-15,34;UBERON:0001869,7.10e-14,32;UBERON:0002780,1.92e-13,41;UBERON:0001890,1.92e-13,41;UBERON:0003080,1.92e-13,41;UBERON:0006240,1.92e-13,41;UBERON:0000956,2.01e-13,25;UBERON:0000203,2.01e-13,25;UBERON:0002619,5.22e-13,22;UBERON:0000073,1.63e-12,53;UBERON:0002616,1.63e-12,53;UBERON:0001017,4.38e-12,81;UBERON:0001950,7.52e-12,20;UBERON:0001049,1.29e-11,56;UBERON:0005068,1.29e-11,56;UBERON:0006241,1.29e-11,56;UBERON:0007135,1.29e-11,56;UBERON:0003056,1.92e-11,61;UBERON:0000955,4.17e-11,68;UBERON:0006238,4.17e-11,68;UBERON:0010314,6.05e-11,132;UBERON:0002346,6.98e-11,86;UBERON:0003075,1.48e-10,82;UBERON:0007284,1.48e-10,82;UBERON:0004121,2.41e-10,171;UBERON:0000924,2.41e-10,171;UBERON:0006601,2.41e-10,171;UBERON:0001016,2.46e-10,89;UBERON:0010371,4.10e-10,104;UBERON:0002771,4.65e-07,2 | |||
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|phase1_expression=0.181678379270557,1.49870366723688,0.140954404095971,0,1.34088328328186,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.495065411840187,0,1.34465029290355,0,0.730310090387373,0.975865597581014,0,0.204000691244253,0.313454721478088,0.572471974262113,0.273748850145768,1.38096903554283,0,0.0821005894499457,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0.217010870715852,0,0,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.419317291016752,0.44931452458598,0.300353785683013,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.255725123687061,0,0.50133791063589,1.59331170856906,0,0.486634870302636,0.472674085820339,1.10864698731282,1.14185221401064,0.0654895377488563,0,0.370784442784429,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.357198913136319,0,0.112611480483322,0,0,0,0,0,0,0,0.886413581652058,0.264818361626438,0,0,0,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0.570471821544449,0.896692083310806,0.117434498643765,0,0.140450806702248,0.204154171254893,0.368502951935304,0.413303124703062,1.18800285728205,0.989067717114227,0,0,1.0100166837244,0,0,0,0.30648779579902,0,0.340296549480063,0,1.06778694409284,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0.744467425326359,0.168776332241266,0,0.757301322732344,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0.272746120590835,0,1.21973706129595,0.530119073285941,0.116193942869518,0.414644220061482,0.252320850875628,1.82488679537915,0,1.28648187638577,1.38134921352481,2.3218396401599,0,0.591534000199219,0.337169380156203,0.241011029883482,0.55146986366197,0.217879444092406,0,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,2.53510069643662,0.982827216677626,1.18157981336281,0,0.122988438543114,1.02940686179115,0.219500570817251,0,0.804231779293047,0.0925884451585296,0,0,0,0.115930404975077,0.469634776943287,0,0,1.14152491340759,0.790204397959275,0,0,0.234004265139238,0.445893486866185,0,0.671928512795438,0.567100388969546,0.268675568108545,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0.600686115687835,0,0,0,0.22001485746285,0,0,1.690605505112,0,1.04007436911366,0,1.41849132023278,0.266422179016099,2.43062589218851,1.08524321078289,0.823240336780769,0,1.06617584622764,0,1.80863626235752,0,3.09916272664377,0,0,6.32501818449095,0.239624855491583,0,1.42636905040718,0.144781306667579,0.61642896765115,0.179060963239896,0.112085143993527,0,0,0,0,0,0.773288812777695,1.17261385734044,0,0,0,0,0,1.00034104211935,0.271265023699736,0.623912584592421,1.07057393278297,0.630809660135739,0.585707074963566,0,0,0,0.664225598535437,0,0.521301686808497,0,0,0,0,0,0,0,0,0,0.306923946576125,0.561320188866147,0.128139149255701,0.511707249066704,0.64341568457443,0,0.616838775210622,0,0.0821271560138091,0.519254429183621,0.813472649219715,0.846016147141356,0.200506470303285,0.276242966807689,0.229628896329213,0.364182336013434,0.655622074797121,0,0.693138033939733,0,0,0.527758144464379,0,0,0.863663664408557,0,0,0,0,0,0,1.09629938322967,0.522870902049801,0,0.328014645699706,0,0.206082023295445,0.54941678891006,0.247528499761764,0,0,0,0,0,0,0.137836572484531,0.322260734604821,0.725083469571143,0.170453254832202,0.267096106940212,0.826424576804891,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0.731140468893853,0,0,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0.430234056612155,0.392996164052485,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0.185803175125719,0.28853842595289,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0.879049075631364,0.36408156524854,0,0,0.23874448473769,0.296964680832639,0,0.994147647766298,1.40669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0.20453736500431,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,1.93866549219044,1.20598527610407,0,0.260427761085233,0,0,0,0.254253650292766,0.236387681767936,0,0,0.520874984799877,0,1.20596438625408,1.52581736317083,0.995213339381022,0.886642856860642,0,0,0,0.307801034015188,0,0.69169171316418,0.538545866458633,1.73835795075213,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0.189753732724185,0.158936578980379,0.421996129056054,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0,0,0.104421949505455,0.471807930864739,0,0.468528891450678,0.182454789215666,0,0,0.789168805698781,0,0.91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| ||
|short_description=p5@ITSN1 | |||
}} | }} |
Latest revision as of 05:06, 18 September 2015
Short description: | p5@ITSN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ITSN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 355bp_to_ENST00000474132_5end |
EntrezGene: | ITSN1 |
HGNC: | 6183 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striated muscle cell | 1.95e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
regional part of telencephalon | 5.53e-16 | 32 |
brain grey matter | 7.50e-15 | 34 |
gray matter | 7.50e-15 | 34 |
telencephalon | 7.50e-15 | 34 |
cerebral hemisphere | 7.10e-14 | 32 |
regional part of forebrain | 1.92e-13 | 41 |
forebrain | 1.92e-13 | 41 |
anterior neural tube | 1.92e-13 | 41 |
future forebrain | 1.92e-13 | 41 |
cerebral cortex | 2.01e-13 | 25 |
pallium | 2.01e-13 | 25 |
regional part of cerebral cortex | 5.22e-13 | 22 |
regional part of nervous system | 1.63e-12 | 53 |
regional part of brain | 1.63e-12 | 53 |
central nervous system | 4.38e-12 | 81 |
neocortex | 7.52e-12 | 20 |
neural tube | 1.29e-11 | 56 |
neural rod | 1.29e-11 | 56 |
future spinal cord | 1.29e-11 | 56 |
neural keel | 1.29e-11 | 56 |
pre-chordal neural plate | 1.92e-11 | 61 |
brain | 4.17e-11 | 68 |
future brain | 4.17e-11 | 68 |
structure with developmental contribution from neural crest | 6.05e-11 | 132 |
neurectoderm | 6.98e-11 | 86 |
neural plate | 1.48e-10 | 82 |
presumptive neural plate | 1.48e-10 | 82 |
ectoderm-derived structure | 2.41e-10 | 171 |
ectoderm | 2.41e-10 | 171 |
presumptive ectoderm | 2.41e-10 | 171 |
nervous system | 2.46e-10 | 89 |
ecto-epithelium | 4.10e-10 | 104 |
middle temporal gyrus | 4.65e-07 | 2 |