FFCP PHASE1:Hg19::chr5:143584901..143584987,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57528 | |EntrezGene=57528 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29244 | |HGNC=29244 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=61bp_to_ENST00000507359,uc003lnn.1_5end | |association_with_transcript=61bp_to_ENST00000507359,uc003lnn.1_5end | ||
|cluster_id=chr5:143584901..143584987,+ | |||
|coexpression_cluster_id=C4474 | |coexpression_cluster_id=C4474 | ||
|description=CAGE_peak_1_at_KCTD16_5end | |description=CAGE_peak_1_at_KCTD16_5end | ||
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|ontology_enrichment_celltype=CL:0000359!9.08e-14!32;CL:0000192!2.33e-13!42;CL:0000514!2.33e-13!42;CL:0000055!3.13e-13!180;CL:0000680!1.45e-09!57;CL:0000056!1.45e-09!57;CL:0000355!1.45e-09!57;CL:0000187!1.46e-09!54;CL:0000393!3.89e-09!60;CL:0000211!3.89e-09!60;CL:0000183!5.03e-08!59;CL:0000057!2.10e-07!75;CL:0000222!7.55e-07!119 | |ontology_enrichment_celltype=CL:0000359!9.08e-14!32;CL:0000192!2.33e-13!42;CL:0000514!2.33e-13!42;CL:0000055!3.13e-13!180;CL:0000680!1.45e-09!57;CL:0000056!1.45e-09!57;CL:0000355!1.45e-09!57;CL:0000187!1.46e-09!54;CL:0000393!3.89e-09!60;CL:0000211!3.89e-09!60;CL:0000183!5.03e-08!59;CL:0000057!2.10e-07!75;CL:0000222!7.55e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.49e-14;32!CL:0000192;4.52e-11;43 | |ontology_enrichment_celltype_v019=CL:0000359;1.49e-14;32!CL:0000192;4.52e-11;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.27e-15,32;CL:0000192,1.25e-14,43;CL:0000514,1.25e-14,43;CL:0000187,8.70e-10,55;CL:0000393,9.65e-10,61;CL:0000211,9.65e-10,61;CL:0000680,1.85e-09,58;CL:0000056,1.85e-09,58;CL:0000355,1.85e-09,58 | |||
|ontology_enrichment_development_v019=CL:0000514;4.52e-11;43 | |ontology_enrichment_development_v019=CL:0000514;4.52e-11;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.00e-23!57;UBERON:0005068!3.00e-23!57;UBERON:0006241!3.00e-23!57;UBERON:0007135!3.00e-23!57;UBERON:0000025!1.27e-22!194;UBERON:0002780!1.83e-22!41;UBERON:0001890!1.83e-22!41;UBERON:0006240!1.83e-22!41;UBERON:0003080!1.84e-21!42;UBERON:0005743!7.21e-21!86;UBERON:0002616!1.04e-20!59;UBERON:0003075!1.47e-20!86;UBERON:0007284!1.47e-20!86;UBERON:0001869!1.53e-20!32;UBERON:0001893!1.77e-20!34;UBERON:0002020!3.11e-20!34;UBERON:0003528!3.11e-20!34;UBERON:0002791!1.07e-19!33;UBERON:0001017!1.24e-19!82;UBERON:0000073!2.47e-19!94;UBERON:0001016!2.47e-19!94;UBERON:0002619!6.44e-19!22;UBERON:0002346!6.60e-19!90;UBERON:0000955!1.43e-18!69;UBERON:0006238!1.43e-18!69;UBERON:0003056!2.69e-18!61;UBERON:0001950!1.79e-17!20;UBERON:0000956!5.22e-16!25;UBERON:0000203!5.22e-16!25;UBERON:0000483!1.46e-15!309;UBERON:0001637!1.53e-15!42;UBERON:0003509!1.53e-15!42;UBERON:0004572!1.53e-15!42;UBERON:0004111!1.53e-15!241;UBERON:0000119!6.78e-15!312;UBERON:0000477!9.62e-15!286;UBERON:0000475!3.35e-14!365;UBERON:0004573!4.24e-13!33;UBERON:0004571!4.24e-13!33;UBERON:0007023!1.24e-12!115;UBERON:0000033!9.03e-12!123;UBERON:0004872!2.16e-11!84;UBERON:0000153!2.38e-11!129;UBERON:0007811!2.38e-11!129;UBERON:0000481!5.93e-11!347;UBERON:0001981!7.80e-11!60;UBERON:0007500!7.80e-11!60;UBERON:0004537!7.80e-11!60;UBERON:0006965!7.80e-11!60;UBERON:0001134!3.17e-10!61;UBERON:0002036!3.17e-10!61;UBERON:0003082!3.17e-10!61;UBERON:0002385!9.14e-10!63;UBERON:0001015!9.14e-10!63;UBERON:0000383!9.14e-10!63;UBERON:0004121!2.38e-08!169;UBERON:0000055!3.61e-08!69;UBERON:0002049!3.93e-08!79;UBERON:0007798!3.93e-08!79;UBERON:0000924!8.27e-08!173;UBERON:0006601!8.27e-08!173;UBERON:0000468!1.16e-07!659;UBERON:0001871!2.14e-07!7;UBERON:0000947!5.02e-07!21;UBERON:0010191!5.02e-07!21;UBERON:0004290!5.74e-07!70;UBERON:0000914!6.19e-07!83;UBERON:0002329!6.19e-07!83;UBERON:0003077!6.19e-07!83;UBERON:0003059!6.19e-07!83;UBERON:0007282!6.19e-07!83;UBERON:0009618!6.19e-07!83;UBERON:0007285!6.19e-07!83 | |ontology_enrichment_uberon=UBERON:0001049!3.00e-23!57;UBERON:0005068!3.00e-23!57;UBERON:0006241!3.00e-23!57;UBERON:0007135!3.00e-23!57;UBERON:0000025!1.27e-22!194;UBERON:0002780!1.83e-22!41;UBERON:0001890!1.83e-22!41;UBERON:0006240!1.83e-22!41;UBERON:0003080!1.84e-21!42;UBERON:0005743!7.21e-21!86;UBERON:0002616!1.04e-20!59;UBERON:0003075!1.47e-20!86;UBERON:0007284!1.47e-20!86;UBERON:0001869!1.53e-20!32;UBERON:0001893!1.77e-20!34;UBERON:0002020!3.11e-20!34;UBERON:0003528!3.11e-20!34;UBERON:0002791!1.07e-19!33;UBERON:0001017!1.24e-19!82;UBERON:0000073!2.47e-19!94;UBERON:0001016!2.47e-19!94;UBERON:0002619!6.44e-19!22;UBERON:0002346!6.60e-19!90;UBERON:0000955!1.43e-18!69;UBERON:0006238!1.43e-18!69;UBERON:0003056!2.69e-18!61;UBERON:0001950!1.79e-17!20;UBERON:0000956!5.22e-16!25;UBERON:0000203!5.22e-16!25;UBERON:0000483!1.46e-15!309;UBERON:0001637!1.53e-15!42;UBERON:0003509!1.53e-15!42;UBERON:0004572!1.53e-15!42;UBERON:0004111!1.53e-15!241;UBERON:0000119!6.78e-15!312;UBERON:0000477!9.62e-15!286;UBERON:0000475!3.35e-14!365;UBERON:0004573!4.24e-13!33;UBERON:0004571!4.24e-13!33;UBERON:0007023!1.24e-12!115;UBERON:0000033!9.03e-12!123;UBERON:0004872!2.16e-11!84;UBERON:0000153!2.38e-11!129;UBERON:0007811!2.38e-11!129;UBERON:0000481!5.93e-11!347;UBERON:0001981!7.80e-11!60;UBERON:0007500!7.80e-11!60;UBERON:0004537!7.80e-11!60;UBERON:0006965!7.80e-11!60;UBERON:0001134!3.17e-10!61;UBERON:0002036!3.17e-10!61;UBERON:0003082!3.17e-10!61;UBERON:0002385!9.14e-10!63;UBERON:0001015!9.14e-10!63;UBERON:0000383!9.14e-10!63;UBERON:0004121!2.38e-08!169;UBERON:0000055!3.61e-08!69;UBERON:0002049!3.93e-08!79;UBERON:0007798!3.93e-08!79;UBERON:0000924!8.27e-08!173;UBERON:0006601!8.27e-08!173;UBERON:0000468!1.16e-07!659;UBERON:0001871!2.14e-07!7;UBERON:0000947!5.02e-07!21;UBERON:0010191!5.02e-07!21;UBERON:0004290!5.74e-07!70;UBERON:0000914!6.19e-07!83;UBERON:0002329!6.19e-07!83;UBERON:0003077!6.19e-07!83;UBERON:0003059!6.19e-07!83;UBERON:0007282!6.19e-07!83;UBERON:0009618!6.19e-07!83;UBERON:0007285!6.19e-07!83 | ||
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| ||
|short_description=p1@KCTD16 | |short_description=p1@KCTD16 | ||
}} | }} |
Latest revision as of 18:52, 15 September 2015
Short description: | p1@KCTD16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCTD16_5end |
Coexpression cluster: | C4474_occipital_medial_Smooth_insula_Mesenchymal_hippocampus_parietal |
Association with transcript: | 61bp_to_ENST00000507359, uc003lnn.1_5end |
EntrezGene: | KCTD16 |
HGNC: | 29244 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.27e-15 | 32 |
smooth muscle cell | 1.25e-14 | 43 |
smooth muscle myoblast | 1.25e-14 | 43 |
muscle cell | 8.70e-10 | 55 |
electrically responsive cell | 9.65e-10 | 61 |
electrically active cell | 9.65e-10 | 61 |
muscle precursor cell | 1.85e-09 | 58 |
myoblast | 1.85e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.85e-09 | 58 |