FFCP PHASE1:Hg19::chr7:32110836..32110845,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5137 | |EntrezGene=5137 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8776 | |HGNC=8776 | ||
|TSSclassifier=strong | |||
|UniProt=B3KSS6,Q14123,Q8NB10 | |UniProt=B3KSS6,Q14123,Q8NB10 | ||
|association_with_transcript=134bp_to_NM_001191059,uc003tcn.1_5end | |association_with_transcript=134bp_to_NM_001191059,uc003tcn.1_5end | ||
|cluster_id=chr7:32110836..32110845,- | |||
|description=CAGE_peak_9_at_PDE1C_5end | |description=CAGE_peak_9_at_PDE1C_5end | ||
|id=chr7:32110836..32110845,- | |id=chr7:32110836..32110845,- | ||
|ontology_enrichment_celltype=CL:0000057!5.85e-12!75;CL:0000055!1.56e-08!180;CL:0002620!1.60e-07!23;CL:0002334!5.89e-07!12 | |ontology_enrichment_celltype=CL:0000057!5.85e-12!75;CL:0000055!1.56e-08!180;CL:0002620!1.60e-07!23;CL:0002334!5.89e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002579;1.21e-16;3!CL:0000197;9.27e-09;6!CL:0000098;9.27e-09;6!CL:0002167;9.27e-09;6!CL:0002334;2.07e-07;12!CL:0002591;4.68e-07;1 | |ontology_enrichment_celltype_v019=CL:0002579;1.21e-16;3!CL:0000197;9.27e-09;6!CL:0000098;9.27e-09;6!CL:0002167;9.27e-09;6!CL:0002334;2.07e-07;12!CL:0002591;4.68e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002579,1.22e-16,3;CL:0000197,6.56e-09,6;CL:0000098,6.56e-09,6;CL:0002167,6.56e-09,6;CL:0000057,6.68e-08,76;CL:0002334,2.15e-07,12;CL:0002591,4.97e-07,1;CL:0000511,8.75e-07,1;CL:0002625,8.75e-07,1;CL:0000216,8.75e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.93e-08;3!UBERON:0005425;3.03e-07;1 | |ontology_enrichment_development_v019=UBERON:0003056;1.93e-08;3!UBERON:0005425;3.03e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:3112,7.82e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.95e-12!34;UBERON:0002791!8.16e-12!33;UBERON:0001049!4.30e-11!57;UBERON:0005068!4.30e-11!57;UBERON:0006241!4.30e-11!57;UBERON:0007135!4.30e-11!57;UBERON:0002020!6.02e-11!34;UBERON:0003528!6.02e-11!34;UBERON:0001869!8.62e-11!32;UBERON:0002780!2.45e-10!41;UBERON:0001890!2.45e-10!41;UBERON:0006240!2.45e-10!41;UBERON:0000955!3.77e-10!69;UBERON:0006238!3.77e-10!69;UBERON:0007023!6.21e-10!115;UBERON:0003080!6.23e-10!42;UBERON:0000956!6.32e-10!25;UBERON:0000203!6.32e-10!25;UBERON:0000073!8.39e-10!94;UBERON:0001016!8.39e-10!94;UBERON:0001017!1.03e-09!82;UBERON:0005743!1.32e-09!86;UBERON:0002616!1.80e-09!59;UBERON:0002619!3.07e-09!22;UBERON:0003075!5.10e-08!86;UBERON:0007284!5.10e-08!86;UBERON:0001950!7.22e-08!20;UBERON:0002346!2.95e-07!90;UBERON:0000475!5.56e-07!365 | |ontology_enrichment_uberon=UBERON:0001893!1.95e-12!34;UBERON:0002791!8.16e-12!33;UBERON:0001049!4.30e-11!57;UBERON:0005068!4.30e-11!57;UBERON:0006241!4.30e-11!57;UBERON:0007135!4.30e-11!57;UBERON:0002020!6.02e-11!34;UBERON:0003528!6.02e-11!34;UBERON:0001869!8.62e-11!32;UBERON:0002780!2.45e-10!41;UBERON:0001890!2.45e-10!41;UBERON:0006240!2.45e-10!41;UBERON:0000955!3.77e-10!69;UBERON:0006238!3.77e-10!69;UBERON:0007023!6.21e-10!115;UBERON:0003080!6.23e-10!42;UBERON:0000956!6.32e-10!25;UBERON:0000203!6.32e-10!25;UBERON:0000073!8.39e-10!94;UBERON:0001016!8.39e-10!94;UBERON:0001017!1.03e-09!82;UBERON:0005743!1.32e-09!86;UBERON:0002616!1.80e-09!59;UBERON:0002619!3.07e-09!22;UBERON:0003075!5.10e-08!86;UBERON:0007284!5.10e-08!86;UBERON:0001950!7.22e-08!20;UBERON:0002346!2.95e-07!90;UBERON:0000475!5.56e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.42e-08;6!UBERON:0002358;1.42e-08;6!UBERON:0003684;1.42e-08;6!UBERON:0001178;1.42e-08;6!UBERON:0000941;3.03e-07;1!UBERON:0007195;3.03e-07;1!UBERON:0001785;3.03e-07;1!UBERON:0002464;3.03e-07;1!UBERON:0004904;3.03e-07;1!UBERON:0001021;3.03e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.42e-08;6!UBERON:0002358;1.42e-08;6!UBERON:0003684;1.42e-08;6!UBERON:0001178;1.42e-08;6!UBERON:0000941;3.03e-07;1!UBERON:0007195;3.03e-07;1!UBERON:0001785;3.03e-07;1!UBERON:0002464;3.03e-07;1!UBERON:0004904;3.03e-07;1!UBERON:0001021;3.03e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.42e-08,6;UBERON:0002358,1.42e-08,6;UBERON:0003684,1.42e-08,6;UBERON:0001178,1.42e-08,6;UBERON:0007195,2.95e-07,1;UBERON:0000941,3.13e-07,1;UBERON:0001785,3.13e-07,1;UBERON:0002464,3.13e-07,1;UBERON:0004904,3.13e-07,1;UBERON:0001021,3.13e-07,1;UBERON:0003902,3.13e-07,1;UBERON:0005425,3.13e-07,1;UBERON:0001136,8.75e-07,1;UBERON:0001343,8.75e-07,1;UBERON:0004910,8.75e-07,1;UBERON:0005154,8.75e-07,1;UBERON:0005295,8.75e-07,1;UBERON:0004813,8.75e-07,1;UBERON:0005297,8.75e-07,1;UBERON:0005294,8.75e-07,1;UBERON:0010141,8.75e-07,1;UBERON:0005891,8.75e-07,1 | |||
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| ||
|short_description=p9@PDE1C | |short_description=p9@PDE1C | ||
}} | }} |
Latest revision as of 07:25, 18 September 2015
Short description: | p9@PDE1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PDE1C_5end |
Coexpression cluster: | NA |
Association with transcript: | 134bp_to_NM_001191059, uc003tcn.1_5end |
EntrezGene: | PDE1C |
HGNC: | 8776 |
UniProt: | B3KSS6Q14123Q8NB10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 1.22e-16 | 3 |
receptor cell | 6.56e-09 | 6 |
sensory epithelial cell | 6.56e-09 | 6 |
olfactory epithelial cell | 6.56e-09 | 6 |
fibroblast | 6.68e-08 | 76 |
preadipocyte | 2.15e-07 | 12 |
smooth muscle cell of the pulmonary artery | 4.97e-07 | 1 |
androgen binding protein secreting cell | 8.75e-07 | 1 |
seminiferous tubule epithelial cell | 8.75e-07 | 1 |
Sertoli cell | 8.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.42e-08 | 6 |
peritoneum | 1.42e-08 | 6 |
abdominal cavity | 1.42e-08 | 6 |
visceral peritoneum | 1.42e-08 | 6 |
stroma of bone marrow | 2.95e-07 | 1 |
cranial nerve II | 3.13e-07 | 1 |
cranial nerve | 3.13e-07 | 1 |
nerve trunk | 3.13e-07 | 1 |
nerve connecting eye with brain | 3.13e-07 | 1 |
nerve | 3.13e-07 | 1 |
retinal neural layer | 3.13e-07 | 1 |
presumptive neural retina | 3.13e-07 | 1 |
mesothelium | 8.75e-07 | 1 |
seminiferous tubule of testis | 8.75e-07 | 1 |
epithelium of male gonad | 8.75e-07 | 1 |
epithelial cord | 8.75e-07 | 1 |
sex cord | 8.75e-07 | 1 |
seminiferous tubule epithelium | 8.75e-07 | 1 |
testis sex cord | 8.75e-07 | 1 |
genital ridge | 8.75e-07 | 1 |
primitive sex cord of indifferent gonad | 8.75e-07 | 1 |
coelomic epithelium | 8.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 7.82e-07 | 1 |