FFCP PHASE1:Hg19::chr21:32653398..32653401,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:32653398..32653401,-
|short_description=p@chr21:32653398..32653401,-
|description=CAGE_peak_at_chr21:32653398..32653401,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:32653398..32653401,- | |||
|description=CAGE_peak_at_chr21:32653398..32653401,- | |||
|id=chr21:32653398..32653401,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0001014;5.48e-18;2!CL:0001016;5.48e-18;2!CL:0000322;2.74e-12;3!CL:0000453;5.35e-08;5!CL:0000840;7.17e-07;5!CL:0000540;8.72e-07;6!CL:0000404;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.48e-18,2;CL:0001016,5.48e-18,2;CL:0000322,3.24e-12,3;CL:0000453,5.35e-08,5;CL:0000840,7.17e-07,5;CL:0001029,7.17e-07,5;CL:0000540,8.48e-07,6;CL:0000031,8.48e-07,6;CL:0000404,8.48e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.09e-44;3!CL:0000031;8.72e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;9.86e-18;2!DOID:3908;6.78e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.27e-17,2;DOID:3908,7.49e-08,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;5.74e-23;6!UBERON:0004903;9.86e-18;2!UBERON:0002173;9.86e-18;2!UBERON:0002186;9.86e-18;2!UBERON:0002680;1.09e-15;9!UBERON:0001895;1.09e-15;9!UBERON:0004821;2.74e-12;3!UBERON:0007499;2.74e-12;3!UBERON:0003215;2.74e-12;3!UBERON:0010368;2.74e-12;3!UBERON:0009911;2.74e-12;3!UBERON:0002299;2.74e-12;3!UBERON:0006524;2.74e-12;3!UBERON:0008874;2.74e-12;3!UBERON:0002169;2.74e-12;3!UBERON:0004894;2.74e-12;3!UBERON:0004733;4.94e-12;12!UBERON:0002028;4.94e-12;12!UBERON:0004732;3.47e-11;13!UBERON:0009856;1.50e-09;4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0.209658645508376,0.22465726229299,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493313713811028,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0.649094787309367,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0.290633938513962,0,0,0.176096868026452,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.224170287987055,0,0,0,0,0,1.54657762555539,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0,1.13654458722565,0,0,0,0,0.422008249231538,0,0.16480387422676,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.361789315876224,0,1.87984741883082,2.95547618953547,0,0,0,0,0,0.46112780877612,0.269272933229316,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.208843899010911,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0.207376382794494,0,0,0.313932918407225,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.484945082442097,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0.2249738915515,4.6428117273477,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.235265819698172,0,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.504143392443436,0.138314504928436,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197318320688547,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0.285906176706625,0.316027223465453,0.23248285073625,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0.647428837187895,0,1.1598144313382,0.971421986118279,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0.473314686579554,0.203974470572744,0.436350690340377,0,0,0,0.432626562123789,0.126166424835079,0,0.126698501011437,0.203977659483963,0.26721740526556,0.18378979906969,0,0,0,0,0.310298987585686,0.213233981900981,0.23806443146374,0,0.186224142887574,0,0,0.202117188958219,0.435433495793923,0.342233301085281,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr21:32653398..32653401,- | |||
}} | }} |
Latest revision as of 17:16, 28 July 2015
Short description: | p@chr21:32653398..32653401, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:32653398..32653401, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.48e-18 | 2 |
immature CD1a-positive Langerhans cell | 5.48e-18 | 2 |
pneumocyte | 3.24e-12 | 3 |
Langerhans cell | 5.35e-08 | 5 |
immature conventional dendritic cell | 7.17e-07 | 5 |
common dendritic progenitor | 7.17e-07 | 5 |
neuron | 8.48e-07 | 6 |
neuroblast | 8.48e-07 | 6 |
electrically signaling cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.86e-23 | 6 |
rhombic lip | 4.86e-23 | 6 |
bronchoalveolar duct junction | 1.27e-17 | 2 |
alveolar duct | 1.27e-17 | 2 |
bronchiole | 1.27e-17 | 2 |
regional part of metencephalon | 9.73e-16 | 9 |
metencephalon | 9.73e-16 | 9 |
future metencephalon | 9.73e-16 | 9 |
pulmonary alveolus epithelium | 3.24e-12 | 3 |
alveolus | 3.24e-12 | 3 |
pulmonary lobule | 3.24e-12 | 3 |
lobule | 3.24e-12 | 3 |
alveolus of lung | 3.24e-12 | 3 |
alveolar system | 3.24e-12 | 3 |
pulmonary acinus | 3.24e-12 | 3 |
alveolar sac | 3.24e-12 | 3 |
alveolar wall | 3.24e-12 | 3 |
segmental subdivision of hindbrain | 4.54e-12 | 12 |
hindbrain | 4.54e-12 | 12 |
presumptive hindbrain | 4.54e-12 | 12 |
segmental subdivision of nervous system | 3.21e-11 | 13 |
posterior neural tube | 7.41e-10 | 15 |
chordal neural plate | 7.41e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.27e-17 | 2 |
non-small cell lung carcinoma | 7.49e-08 | 5 |