FFCP PHASE1:Hg19::chr8:16859835..16859861,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26281 | |EntrezGene=26281 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3677 | |HGNC=3677 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NP95 | |UniProt=Q9NP95 | ||
|association_with_transcript=-145bp_to_ENST00000180166_5end | |association_with_transcript=-145bp_to_ENST00000180166_5end | ||
|cluster_id=chr8:16859835..16859861,- | |||
|coexpression_cluster_id=C112 | |coexpression_cluster_id=C112 | ||
|description=CAGE_peak_1_at_FGF20_5end | |description=CAGE_peak_1_at_FGF20_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.10e-09;3!CL:0000214;1.67e-09;3 | |ontology_enrichment_celltype_v019=CL:0000322;1.10e-09;3!CL:0000214;1.67e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.10e-09,3;CL:0000214,1.67e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.26e-25;1!UBERON:0003056;1.81e-09;3 | |ontology_enrichment_development_v019=UBERON:0005425;1.26e-25;1!UBERON:0003056;1.81e-09;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;3.58e-26;1!DOID:1357;3.58e-26;1!DOID:1325;3.06e-15;7!DOID:3904;3.06e-15;7!DOID:0050615;1.01e-14;16!DOID:3910;7.30e-14;2!DOID:3905;4.42e-12;9!DOID:1324;1.27e-07;15!DOID:5409;1.59e-07;4 | |ontology_enrichment_disease_v019=DOID:0050619;3.58e-26;1!DOID:1357;3.58e-26;1!DOID:1325;3.06e-15;7!DOID:3904;3.06e-15;7!DOID:0050615;1.01e-14;16!DOID:3910;7.30e-14;2!DOID:3905;4.42e-12;9!DOID:1324;1.27e-07;15!DOID:5409;1.59e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.58e-26,1;DOID:1357,3.58e-26,1;DOID:1325,3.06e-15,7;DOID:3904,3.06e-15,7;DOID:0050615,1.01e-14,16;DOID:3910,7.30e-14,2;DOID:3905,4.42e-12,9;DOID:1324,1.27e-07,15;DOID:5409,1.59e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.27e-22!57;UBERON:0005068!5.27e-22!57;UBERON:0006241!5.27e-22!57;UBERON:0007135!5.27e-22!57;UBERON:0000955!9.96e-22!69;UBERON:0006238!9.96e-22!69;UBERON:0007023!1.90e-21!115;UBERON:0002616!3.92e-21!59;UBERON:0001893!7.24e-20!34;UBERON:0002780!8.71e-19!41;UBERON:0001890!8.71e-19!41;UBERON:0006240!8.71e-19!41;UBERON:0005743!1.66e-18!86;UBERON:0003080!2.81e-18!42;UBERON:0000073!3.01e-18!94;UBERON:0001016!3.01e-18!94;UBERON:0000153!3.96e-18!129;UBERON:0007811!3.96e-18!129;UBERON:0001017!1.19e-17!82;UBERON:0000033!1.20e-17!123;UBERON:0002791!1.65e-17!33;UBERON:0003075!9.36e-17!86;UBERON:0007284!9.36e-17!86;UBERON:0002346!8.09e-16!90;UBERON:0003056!1.45e-15!61;UBERON:0001869!6.13e-15!32;UBERON:0002020!4.49e-14!34;UBERON:0003528!4.49e-14!34;UBERON:0002619!7.61e-12!22;UBERON:0005162!5.13e-11!2;UBERON:0000122!5.13e-11!2;UBERON:0000956!2.47e-10!25;UBERON:0000203!2.47e-10!25;UBERON:0004121!3.58e-10!169;UBERON:0001950!4.88e-10!20;UBERON:0000924!8.03e-10!173;UBERON:0006601!8.03e-10!173;UBERON:0002298!1.30e-09!8;UBERON:0000349!5.04e-09!5;UBERON:0004732!5.49e-09!13;UBERON:0000064!1.35e-08!219;UBERON:0002420!1.50e-08!9;UBERON:0007245!1.50e-08!9;UBERON:0010009!1.50e-08!9;UBERON:0010011!1.50e-08!9;UBERON:0000454!1.50e-08!9;UBERON:0001896!4.76e-07!3;UBERON:0005290!4.76e-07!3;UBERON:0010096!4.76e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!5.27e-22!57;UBERON:0005068!5.27e-22!57;UBERON:0006241!5.27e-22!57;UBERON:0007135!5.27e-22!57;UBERON:0000955!9.96e-22!69;UBERON:0006238!9.96e-22!69;UBERON:0007023!1.90e-21!115;UBERON:0002616!3.92e-21!59;UBERON:0001893!7.24e-20!34;UBERON:0002780!8.71e-19!41;UBERON:0001890!8.71e-19!41;UBERON:0006240!8.71e-19!41;UBERON:0005743!1.66e-18!86;UBERON:0003080!2.81e-18!42;UBERON:0000073!3.01e-18!94;UBERON:0001016!3.01e-18!94;UBERON:0000153!3.96e-18!129;UBERON:0007811!3.96e-18!129;UBERON:0001017!1.19e-17!82;UBERON:0000033!1.20e-17!123;UBERON:0002791!1.65e-17!33;UBERON:0003075!9.36e-17!86;UBERON:0007284!9.36e-17!86;UBERON:0002346!8.09e-16!90;UBERON:0003056!1.45e-15!61;UBERON:0001869!6.13e-15!32;UBERON:0002020!4.49e-14!34;UBERON:0003528!4.49e-14!34;UBERON:0002619!7.61e-12!22;UBERON:0005162!5.13e-11!2;UBERON:0000122!5.13e-11!2;UBERON:0000956!2.47e-10!25;UBERON:0000203!2.47e-10!25;UBERON:0004121!3.58e-10!169;UBERON:0001950!4.88e-10!20;UBERON:0000924!8.03e-10!173;UBERON:0006601!8.03e-10!173;UBERON:0002298!1.30e-09!8;UBERON:0000349!5.04e-09!5;UBERON:0004732!5.49e-09!13;UBERON:0000064!1.35e-08!219;UBERON:0002420!1.50e-08!9;UBERON:0007245!1.50e-08!9;UBERON:0010009!1.50e-08!9;UBERON:0010011!1.50e-08!9;UBERON:0000454!1.50e-08!9;UBERON:0001896!4.76e-07!3;UBERON:0005290!4.76e-07!3;UBERON:0010096!4.76e-07!3 | ||
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|short_description=p1@FGF20 | |short_description=p1@FGF20 | ||
}} | }} |
Latest revision as of 03:41, 17 September 2015
Short description: | p1@FGF20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FGF20_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | -145bp_to_ENST00000180166_5end |
EntrezGene: | FGF20 |
HGNC: | 3677 |
UniProt: | Q9NP95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.10e-09 | 3 |
synovial cell | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.58e-26 | 1 |
paranasal sinus | 3.58e-26 | 1 |
cranial nerve II | 1.26e-25 | 1 |
cranial nerve | 1.26e-25 | 1 |
nerve trunk | 1.26e-25 | 1 |
nerve connecting eye with brain | 1.26e-25 | 1 |
nerve | 1.26e-25 | 1 |
retinal neural layer | 1.26e-25 | 1 |
presumptive neural retina | 1.26e-25 | 1 |
bronchoalveolar duct junction | 7.30e-14 | 2 |
alveolar duct | 7.30e-14 | 2 |
bronchiole | 7.30e-14 | 2 |
neural tissue | 1.55e-13 | 2 |
multi cell component structure | 1.55e-13 | 2 |
neuron projection bundle | 1.55e-13 | 2 |
pulmonary alveolus epithelium | 1.10e-09 | 3 |
alveolus | 1.10e-09 | 3 |
pulmonary lobule | 1.10e-09 | 3 |
lobule | 1.10e-09 | 3 |
alveolus of lung | 1.10e-09 | 3 |
alveolar system | 1.10e-09 | 3 |
pulmonary acinus | 1.10e-09 | 3 |
alveolar sac | 1.10e-09 | 3 |
alveolar wall | 1.10e-09 | 3 |
stratified squamous epithelium | 1.67e-09 | 3 |
layer of synovial tissue | 1.67e-09 | 3 |
synovial joint | 1.67e-09 | 3 |
synovial membrane of synovial joint | 1.67e-09 | 3 |
layer of retina | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.58e-26 | 1 |
maxillary sinus cancer | 3.58e-26 | 1 |
bronchus cancer | 3.06e-15 | 7 |
bronchogenic carcinoma | 3.06e-15 | 7 |
respiratory system cancer | 1.01e-14 | 16 |
lung adenocarcinoma | 7.30e-14 | 2 |
lung carcinoma | 4.42e-12 | 9 |
lung cancer | 1.27e-07 | 15 |
lung small cell carcinoma | 1.59e-07 | 4 |