FFCP PHASE1:Hg19::chr8:126444797..126444810,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10221 | |EntrezGene=10221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16891 | |HGNC=16891 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-290bp_to_ENST00000521778_5end | |association_with_transcript=-290bp_to_ENST00000521778_5end | ||
|cluster_id=chr8:126444797..126444810,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_19_at_TRIB1_5end | |description=CAGE_peak_19_at_TRIB1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!1.64e-72!42;CL:0000860!5.26e-67!45;CL:0000766!2.40e-65!76;CL:0002194!9.20e-50!63;CL:0000576!9.20e-50!63;CL:0000040!9.20e-50!63;CL:0000559!9.20e-50!63;CL:0000839!3.17e-49!70;CL:0000557!2.17e-48!71;CL:0002009!6.14e-48!65;CL:0000763!1.45e-40!112;CL:0000049!1.45e-40!112;CL:0000738!4.20e-35!140;CL:0002087!2.33e-26!119;CL:0000037!3.01e-26!172;CL:0000566!3.01e-26!172;CL:0002032!4.34e-25!165;CL:0000837!4.34e-25!165;CL:0002031!7.21e-25!124;CL:0000988!4.02e-24!182;CL:0000094!4.79e-17!8;CL:0000081!4.46e-12!11;CL:0000134!1.32e-10!358;CL:0002320!3.76e-10!365;CL:0000219!3.86e-09!390;CL:0000767!7.53e-09!3;CL:0000723!2.05e-07!436;CL:0000048!3.47e-07!430;CL:0000771!4.55e-07!2;CL:0000034!4.76e-07!444 | |ontology_enrichment_celltype=CL:0002057!1.64e-72!42;CL:0000860!5.26e-67!45;CL:0000766!2.40e-65!76;CL:0002194!9.20e-50!63;CL:0000576!9.20e-50!63;CL:0000040!9.20e-50!63;CL:0000559!9.20e-50!63;CL:0000839!3.17e-49!70;CL:0000557!2.17e-48!71;CL:0002009!6.14e-48!65;CL:0000763!1.45e-40!112;CL:0000049!1.45e-40!112;CL:0000738!4.20e-35!140;CL:0002087!2.33e-26!119;CL:0000037!3.01e-26!172;CL:0000566!3.01e-26!172;CL:0002032!4.34e-25!165;CL:0000837!4.34e-25!165;CL:0002031!7.21e-25!124;CL:0000988!4.02e-24!182;CL:0000094!4.79e-17!8;CL:0000081!4.46e-12!11;CL:0000134!1.32e-10!358;CL:0002320!3.76e-10!365;CL:0000219!3.86e-09!390;CL:0000767!7.53e-09!3;CL:0000723!2.05e-07!436;CL:0000048!3.47e-07!430;CL:0000771!4.55e-07!2;CL:0000034!4.76e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.32e-83;33!CL:0002057;9.32e-83;33!CL:0000473;2.10e-58;39!CL:0000234;2.10e-58;39!CL:0000576;4.33e-47;48!CL:0000766;1.53e-32;69!CL:0000771;2.88e-16;2!CL:0000763;4.37e-16;100!CL:0000094;1.51e-15;8!CL:0000081;2.32e-11;11!CL:0000775;3.25e-11;3!CL:0002087;4.74e-11;104!CL:0000738;8.86e-09;136!CL:0000219;5.15e-07;193 | |ontology_enrichment_celltype_v019=CL:0000860;9.32e-83;33!CL:0002057;9.32e-83;33!CL:0000473;2.10e-58;39!CL:0000234;2.10e-58;39!CL:0000576;4.33e-47;48!CL:0000766;1.53e-32;69!CL:0000771;2.88e-16;2!CL:0000763;4.37e-16;100!CL:0000094;1.51e-15;8!CL:0000081;2.32e-11;11!CL:0000775;3.25e-11;3!CL:0002087;4.74e-11;104!CL:0000738;8.86e-09;136!CL:0000219;5.15e-07;193 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.88e-85,42;CL:0002057,7.88e-85,42;CL:0000473,8.64e-74,48;CL:0000234,8.64e-74,48;CL:0000766,2.81e-67,72;CL:0002194,2.51e-58,59;CL:0000576,2.51e-58,59;CL:0000040,2.51e-58,59;CL:0000559,2.51e-58,59;CL:0002009,2.49e-56,61;CL:0000839,7.36e-52,66;CL:0000557,4.81e-51,67;CL:0000763,7.99e-44,108;CL:0000049,7.99e-44,108;CL:0000738,4.36e-34,136;CL:0002087,2.07e-28,115;CL:0002032,3.15e-28,161;CL:0000837,3.15e-28,161;CL:0002031,4.41e-27,120;CL:0000037,6.74e-27,168;CL:0000988,2.44e-25,177;CL:0000771,2.56e-16,2;CL:0000094,1.28e-15,8;CL:0000081,2.05e-11,11;CL:0000775,2.78e-11,3;CL:0000134,1.13e-10,354;CL:0002320,2.20e-10,361;CL:0000219,2.28e-09,386;CL:0000048,4.01e-08,427;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.24e-63;42!CL:0000049;1.25e-12;108 | |ontology_enrichment_development_v019=CL:0002057;5.24e-63;42!CL:0000049;1.25e-12;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.31e-42!80;UBERON:0002390!1.75e-40!102;UBERON:0003061!1.75e-40!102;UBERON:0001474!3.53e-38!86;UBERON:0002193!7.48e-36!112;UBERON:0004765!7.40e-33!101;UBERON:0001434!7.40e-33!101;UBERON:0002405!6.85e-31!115;UBERON:0002204!5.96e-18!167;UBERON:0003081!6.43e-16!216;UBERON:0002384!1.56e-09!375 | |ontology_enrichment_uberon=UBERON:0002371!8.31e-42!80;UBERON:0002390!1.75e-40!102;UBERON:0003061!1.75e-40!102;UBERON:0001474!3.53e-38!86;UBERON:0002193!7.48e-36!112;UBERON:0004765!7.40e-33!101;UBERON:0001434!7.40e-33!101;UBERON:0002405!6.85e-31!115;UBERON:0002204!5.96e-18!167;UBERON:0003081!6.43e-16!216;UBERON:0002384!1.56e-09!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.17e-44,76;UBERON:0001474,3.62e-41,82;UBERON:0004765,3.15e-37,90;UBERON:0002405,6.36e-36,93;UBERON:0002390,6.36e-34,98;UBERON:0003061,6.36e-34,98;UBERON:0001434,3.53e-33,100;UBERON:0002193,1.79e-30,108;UBERON:0002204,1.89e-18,167;UBERON:0003081,1.62e-14,203;UBERON:0002384,5.43e-10,371;UBERON:0000926,5.63e-08,315;UBERON:0004120,5.63e-08,315;UBERON:0006603,5.63e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,2.21598163412751,0.200544447470142,1.08505435357926,0,0,0,0.726991193897824,0.377875943688809,0.727752183563449,1.85943229524548,2.46700732813095,5.26500830521676,8.91846416198666,5.12321413058201,8.74984250587765,3.7922024881028,3.87290810150296,9.47985406160392,0.752969358170419,0.818718450173537,0.674170453335254,1.53041946185451,2.24650318953266,1.27867425159808,2.63881040149373,1.99463657621632,1.27867425159808,0.290209238628584,0,0.622822248995575,12.0599359323237,5.21482918420201,15.8547856634735,1.21079900526674,2.20966581592539,0.949387162322653,0,0,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24702107184155,0,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0.919036730290385,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0.410651227424988,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0,2.21598163412751,0.200544447470142,1.08505435357926,0,0,0,0.726991193897824,0.377875943688809,0.727752183563449,1.85943229524548,2.46700732813095,5.26500830521676,8.91846416198666,5.12321413058201,8.74984250587765,3.7922024881028,3.87290810150296,9.47985406160392,0.752969358170419,0.818718450173537,0.674170453335254,1.53041946185451,2.24650318953266,1.27867425159808,2.63881040149373,1.99463657621632,1.27867425159808,0.290209238628584,0,0.622822248995575,12.0599359323237,5.21482918420201,15.8547856634735,1.21079900526674,2.20966581592539,0.949387162322653,0,0,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24702107184155,0,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0.919036730290385,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0.410651227424988,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p19@TRIB1 | |short_description=p19@TRIB1 | ||
}} | }} |
Latest revision as of 03:33, 16 September 2015
Short description: | p19@TRIB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_TRIB1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -290bp_to_ENST00000521778_5end |
EntrezGene: | TRIB1 |
HGNC: | 16891 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.88e-85 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.88e-85 | 42 |
defensive cell | 8.64e-74 | 48 |
phagocyte | 8.64e-74 | 48 |
myeloid leukocyte | 2.81e-67 | 72 |
monopoietic cell | 2.51e-58 | 59 |
monocyte | 2.51e-58 | 59 |
monoblast | 2.51e-58 | 59 |
promonocyte | 2.51e-58 | 59 |
macrophage dendritic cell progenitor | 2.49e-56 | 61 |
myeloid lineage restricted progenitor cell | 7.36e-52 | 66 |
granulocyte monocyte progenitor cell | 4.81e-51 | 67 |
myeloid cell | 7.99e-44 | 108 |
common myeloid progenitor | 7.99e-44 | 108 |
leukocyte | 4.36e-34 | 136 |
nongranular leukocyte | 2.07e-28 | 115 |
hematopoietic oligopotent progenitor cell | 3.15e-28 | 161 |
hematopoietic multipotent progenitor cell | 3.15e-28 | 161 |
hematopoietic lineage restricted progenitor cell | 4.41e-27 | 120 |
hematopoietic stem cell | 6.74e-27 | 168 |
hematopoietic cell | 2.44e-25 | 177 |
eosinophil | 2.56e-16 | 2 |
granulocyte | 1.28e-15 | 8 |
blood cell | 2.05e-11 | 11 |
neutrophil | 2.78e-11 | 3 |
mesenchymal cell | 1.13e-10 | 354 |
connective tissue cell | 2.20e-10 | 361 |
motile cell | 2.28e-09 | 386 |
multi fate stem cell | 4.01e-08 | 427 |
somatic stem cell | 5.96e-08 | 433 |
stem cell | 9.95e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.17e-44 | 76 |
bone element | 3.62e-41 | 82 |
skeletal element | 3.15e-37 | 90 |
immune system | 6.36e-36 | 93 |
hematopoietic system | 6.36e-34 | 98 |
blood island | 6.36e-34 | 98 |
skeletal system | 3.53e-33 | 100 |
hemolymphoid system | 1.79e-30 | 108 |
musculoskeletal system | 1.89e-18 | 167 |
lateral plate mesoderm | 1.62e-14 | 203 |
connective tissue | 5.43e-10 | 371 |
mesoderm | 5.63e-08 | 315 |
mesoderm-derived structure | 5.63e-08 | 315 |
presumptive mesoderm | 5.63e-08 | 315 |