FFCP PHASE1:Hg19::chr4:187148655..187148687,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3818 | |EntrezGene=3818 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6371 | |HGNC=6371 | ||
|TSSclassifier=strong | |||
|UniProt=C9IYG8,E7EQA8,C9JCT1,E9PBC5,P03952 | |UniProt=C9IYG8,E7EQA8,C9JCT1,E9PBC5,P03952 | ||
|association_with_transcript=0bp_to_ENST00000414291,ENST00000418715,ENST00000446598,ENST00000513864,NM_000892,uc003iyy.2,uc011clc.1,uc011cld.1_5end | |association_with_transcript=0bp_to_ENST00000414291,ENST00000418715,ENST00000446598,ENST00000513864,NM_000892,uc003iyy.2,uc011clc.1,uc011cld.1_5end | ||
|cluster_id=chr4:187148655..187148687,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_KLKB1_5end | |description=CAGE_peak_1_at_KLKB1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002549!1.37e-07!2;CL:0000181!4.84e-07!12;CL:0000417!4.84e-07!12;CL:0000668!4.84e-07!12;CL:0000414!4.84e-07!12;CL:0000412!4.84e-07!12;CL:0000182!4.84e-07!12 | |ontology_enrichment_celltype=CL:0002549!1.37e-07!2;CL:0000181!4.84e-07!12;CL:0000417!4.84e-07!12;CL:0000668!4.84e-07!12;CL:0000414!4.84e-07!12;CL:0000412!4.84e-07!12;CL:0000182!4.84e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.22e-19;12!CL:0000047;2.67e-08;2 | |ontology_enrichment_celltype_v019=CL:0000182;2.22e-19;12!CL:0000047;2.67e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.32e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.01e-12;11!UBERON:0009497;1.87e-10;13 | |ontology_enrichment_development_v019=UBERON:0004161;3.01e-12;11!UBERON:0009497;1.87e-10;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!4.09e-11!26;UBERON:0002368!2.44e-09!35;UBERON:0002107!3.87e-08!19;UBERON:0006925!3.87e-08!19;UBERON:0008836!3.87e-08!19;UBERON:0000949!4.75e-08!45;UBERON:0007023!9.30e-08!115;UBERON:0003947!1.37e-07!2;UBERON:0005629!1.37e-07!2;UBERON:0005358!1.37e-07!2;UBERON:0001886!1.37e-07!2;UBERON:0004086!1.37e-07!2;UBERON:0005282!1.37e-07!2;UBERON:0005281!1.37e-07!2;UBERON:0008835!7.06e-07!22;UBERON:0003894!7.06e-07!22 | |ontology_enrichment_uberon=UBERON:0005057!4.09e-11!26;UBERON:0002368!2.44e-09!35;UBERON:0002107!3.87e-08!19;UBERON:0006925!3.87e-08!19;UBERON:0008836!3.87e-08!19;UBERON:0000949!4.75e-08!45;UBERON:0007023!9.30e-08!115;UBERON:0003947!1.37e-07!2;UBERON:0005629!1.37e-07!2;UBERON:0005358!1.37e-07!2;UBERON:0001886!1.37e-07!2;UBERON:0004086!1.37e-07!2;UBERON:0005282!1.37e-07!2;UBERON:0005281!1.37e-07!2;UBERON:0008835!7.06e-07!22;UBERON:0003894!7.06e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.12e-27;19!UBERON:0006925;8.12e-27;19!UBERON:0002423;2.40e-20;25!UBERON:0002365;1.99e-16;31!UBERON:0002330;1.99e-16;31!UBERON:0002368;4.88e-14;33!UBERON:0000949;2.52e-08;43!UBERON:0000341;2.67e-08;2!UBERON:0005172;1.71e-07;52!UBERON:0005173;1.71e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0002107;8.12e-27;19!UBERON:0006925;8.12e-27;19!UBERON:0002423;2.40e-20;25!UBERON:0002365;1.99e-16;31!UBERON:0002330;1.99e-16;31!UBERON:0002368;4.88e-14;33!UBERON:0000949;2.52e-08;43!UBERON:0000341;2.67e-08;2!UBERON:0005172;1.71e-07;52!UBERON:0005173;1.71e-07;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.50e-27,19;UBERON:0006925,8.50e-27,19;UBERON:0008836,8.50e-27,19;UBERON:0008835,3.99e-23,22;UBERON:0003894,3.99e-23,22;UBERON:0009854,4.10e-22,23;UBERON:0007499,2.48e-20,25;UBERON:0009497,2.48e-20,25;UBERON:0000015,2.48e-20,25;UBERON:0002423,2.48e-20,25;UBERON:0006235,2.48e-20,25;UBERON:0004161,2.48e-20,25;UBERON:0009856,1.53e-19,26;UBERON:0002365,2.32e-16,31;UBERON:0002330,2.32e-16,31;UBERON:0002368,1.83e-14,35;UBERON:0000949,3.41e-11,45;UBERON:0003929,2.80e-09,54;UBERON:0005172,2.80e-09,54;UBERON:0005173,2.80e-09,54;UBERON:0002530,1.82e-08,59;UBERON:0000341,2.48e-08,2;UBERON:0002417,2.55e-08,60;UBERON:0000916,2.55e-08,60;UBERON:0004921,6.34e-07,118 | |||
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| ||
|short_description=p1@KLKB1 | |short_description=p1@KLKB1 | ||
}} | }} |
Latest revision as of 04:45, 17 September 2015
Short description: | p1@KLKB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLKB1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000414291, ENST00000418715, ENST00000446598, ENST00000513864, NM_000892, uc003iyy.2, uc011clc.1, uc011cld.1_5end |
EntrezGene: | KLKB1 |
HGNC: | 6371 |
UniProt: | C9IYG8E7EQA8C9JCT1E9PBC5P03952 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.32e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 8.50e-27 | 19 |
digestive gland | 8.50e-27 | 19 |
liver bud | 8.50e-27 | 19 |
hepatic diverticulum | 3.99e-23 | 22 |
liver primordium | 3.99e-23 | 22 |
digestive tract diverticulum | 4.10e-22 | 23 |
epithelial sac | 2.48e-20 | 25 |
epithelium of foregut-midgut junction | 2.48e-20 | 25 |
anatomical boundary | 2.48e-20 | 25 |
hepatobiliary system | 2.48e-20 | 25 |
foregut-midgut junction | 2.48e-20 | 25 |
septum transversum | 2.48e-20 | 25 |
sac | 1.53e-19 | 26 |
exocrine gland | 2.32e-16 | 31 |
exocrine system | 2.32e-16 | 31 |
endocrine gland | 1.83e-14 | 35 |
endocrine system | 3.41e-11 | 45 |
gut epithelium | 2.80e-09 | 54 |
abdomen element | 2.80e-09 | 54 |
abdominal segment element | 2.80e-09 | 54 |
gland | 1.82e-08 | 59 |
throat | 2.48e-08 | 2 |
abdominal segment of trunk | 2.55e-08 | 60 |
abdomen | 2.55e-08 | 60 |
subdivision of digestive tract | 6.34e-07 | 118 |