FFCP PHASE1:Hg19::chr17:56492953..56492966,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54894 | |EntrezGene=54894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18505 | |HGNC=18505 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=153bp_to_uc010wnv.1_5end | |association_with_transcript=153bp_to_uc010wnv.1_5end | ||
|cluster_id=chr17:56492953..56492966,- | |||
|coexpression_cluster_id=C133 | |coexpression_cluster_id=C133 | ||
|description=CAGE_peak_9_at_RNF43_5end | |description=CAGE_peak_9_at_RNF43_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002178!9.02e-07!3 | |ontology_enrichment_celltype=CL:0002178!9.02e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000047;5.15e-21;2!CL:0000182;3.36e-14;12 | |ontology_enrichment_celltype_v019=CL:0000047;5.15e-21;2!CL:0000182;3.36e-14;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.36e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.17e-15;11!UBERON:0009497;3.43e-13;13 | |ontology_enrichment_development_v019=UBERON:0004161;2.17e-15;11!UBERON:0009497;3.43e-13;13 | ||
|ontology_enrichment_disease=DOID:3493!2.21e-10!2;DOID:305!3.79e-09!106;DOID:3119!9.82e-08!14;DOID:162!3.34e-07!235;DOID:14566!6.22e-07!239 | |ontology_enrichment_disease=DOID:3493!2.21e-10!2;DOID:305!3.79e-09!106;DOID:3119!9.82e-08!14;DOID:162!3.34e-07!235;DOID:14566!6.22e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:3493;3.11e-21;2 | |ontology_enrichment_disease_v019=DOID:3493;3.11e-21;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,3.11e-21,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.36e-09;19!UBERON:0006925;2.36e-09;19!UBERON:0002423;2.43e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.36e-09;19!UBERON:0006925;2.36e-09;19!UBERON:0002423;2.43e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.36e-09,19;UBERON:0006925,2.36e-09,19;UBERON:0008836,2.36e-09,19;UBERON:0008835,3.27e-08,22;UBERON:0003894,3.27e-08,22;UBERON:0009854,6.75e-08,23;UBERON:0007499,2.43e-07,25;UBERON:0009497,2.43e-07,25;UBERON:0000015,2.43e-07,25;UBERON:0002423,2.43e-07,25;UBERON:0006235,2.43e-07,25;UBERON:0004161,2.43e-07,25;UBERON:0009856,4.28e-07,26 | |||
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| ||
|short_description=p9@RNF43 | |short_description=p9@RNF43 | ||
}} | }} |
Latest revision as of 11:23, 16 September 2015
Short description: | p9@RNF43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RNF43_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | 153bp_to_uc010wnv.1_5end |
EntrezGene: | RNF43 |
HGNC: | 18505 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.36e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.36e-09 | 19 |
digestive gland | 2.36e-09 | 19 |
liver bud | 2.36e-09 | 19 |
hepatic diverticulum | 3.27e-08 | 22 |
liver primordium | 3.27e-08 | 22 |
digestive tract diverticulum | 6.75e-08 | 23 |
epithelial sac | 2.43e-07 | 25 |
epithelium of foregut-midgut junction | 2.43e-07 | 25 |
anatomical boundary | 2.43e-07 | 25 |
hepatobiliary system | 2.43e-07 | 25 |
foregut-midgut junction | 2.43e-07 | 25 |
septum transversum | 2.43e-07 | 25 |
sac | 4.28e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.11e-21 | 2 |