FFCP PHASE1:Hg19::chr19:18898451..18898462,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18898451..18898462,- | |||
|coexpression_cluster_id=C240 | |coexpression_cluster_id=C240 | ||
|description=CAGE_peak_at_chr19:18898451..18898462,- | |description=CAGE_peak_at_chr19:18898451..18898462,- | ||
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|short_description=p@chr19:18898451..18898462,- | |short_description=p@chr19:18898451..18898462,- | ||
}} | }} |
Latest revision as of 05:21, 26 July 2015
Short description: | p@chr19:18898451..18898462, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18898451..18898462, - |
Coexpression cluster: | C240_Adipocyte_Preadipocyte_Osteoblast_Chondrocyte_tenocyte_Synoviocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.14e-40 | 15 |
preadipocyte of the breast | 1.78e-24 | 3 |
adipocyte of omentum tissue | 4.23e-24 | 3 |
fibrocyte | 6.77e-24 | 3 |
tendon cell | 6.77e-24 | 3 |
preadipocyte | 6.48e-23 | 12 |
GAG secreting cell | 3.15e-21 | 9 |
carbohydrate secreting cell | 3.15e-21 | 9 |
chondroblast | 1.45e-20 | 6 |
chondrocyte | 1.45e-20 | 6 |
adipocyte of breast | 4.19e-17 | 2 |
stromal cell | 1.52e-16 | 28 |
extracellular matrix secreting cell | 1.08e-12 | 15 |
omentum preadipocyte | 3.60e-11 | 3 |
subcutaneous fat cell | 7.36e-11 | 3 |
perirenal preadipocyte | 5.31e-09 | 1 |
perirenal adipocyte cell | 6.72e-09 | 1 |
mesenchymal cell | 1.45e-08 | 354 |
connective tissue cell | 2.56e-08 | 361 |
motile cell | 1.91e-07 | 386 |
fibroblast | 6.27e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.86e-32 | 6 |
peritoneum | 3.86e-32 | 6 |
abdominal cavity | 3.86e-32 | 6 |
visceral peritoneum | 3.86e-32 | 6 |
dense regular connective tissue | 6.77e-24 | 3 |
tendon | 6.77e-24 | 3 |
regular connective tissue | 6.77e-24 | 3 |
cavity lining | 7.00e-23 | 12 |
serous membrane | 7.00e-23 | 12 |
breast | 7.54e-20 | 10 |
chest | 4.93e-18 | 11 |
perirenal fat | 3.49e-16 | 2 |
adipose tissue | 2.91e-13 | 14 |
subcutaneous adipose tissue | 7.36e-11 | 3 |
penis | 7.85e-09 | 1 |
intromittent organ | 7.85e-09 | 1 |
lateral plate mesenchyme | 7.85e-09 | 1 |
undifferentiated genital tubercle | 7.85e-09 | 1 |
somatopleure | 7.85e-09 | 1 |
tricuspid valve | 1.07e-08 | 1 |
right atrium valve | 1.07e-08 | 1 |
outflow tract of atrium | 1.07e-08 | 1 |
outflow part of right atrium | 1.07e-08 | 1 |
right cardiac atrium | 1.07e-08 | 1 |
connective tissue | 5.57e-08 | 371 |
hypodermis | 7.40e-07 | 5 |