FFCP PHASE1:Hg19::chr21:28941690..28941715,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:28941690..28941715,+
|short_description=p@chr21:28941690..28941715,+
|description=CAGE_peak_at_chr21:28941690..28941715,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:28941690..28941715,+ | |||
|coexpression_cluster_id=C502 | |||
|description=CAGE_peak_at_chr21:28941690..28941715,+ | |||
|id=chr21:28941690..28941715,+ | |||
|ontology_enrichment_celltype=CL:0000680!5.05e-14!57;CL:0000056!5.05e-14!57;CL:0000355!5.05e-14!57;CL:0000187!5.57e-11!54;CL:0000183!1.47e-09!59;CL:0000393!2.64e-09!60;CL:0000211!2.64e-09!60;CL:0000192!4.34e-09!42;CL:0000514!4.34e-09!42;CL:0000055!5.62e-09!180;CL:0000515!7.48e-09!4;CL:0000359!1.10e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000056;3.77e-20;4!CL:0000515;1.18e-12;3!CL:0000680;9.08e-12;7!CL:0000222;2.59e-10;1!CL:0000228;6.32e-10;1!CL:0002372;6.32e-10;1!CL:0002321;1.48e-09;15!CL:0002595;6.09e-08;5!CL:0000197;9.41e-07;6!CL:0000098;9.41e-07;6!CL:0002167;9.41e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,2.55e-20,4;CL:0000228,5.79e-10,1;CL:0002372,5.79e-10,1;CL:0000680,1.40e-08,58;CL:0000056,1.40e-08,58;CL:0000355,1.40e-08,58;CL:0002595,8.04e-08,5;CL:0000197,8.39e-07,6;CL:0000098,8.39e-07,6;CL:0002167,8.39e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000515;3.77e-20;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.61e-14!83;UBERON:0002329!2.61e-14!83;UBERON:0003077!2.61e-14!83;UBERON:0003059!2.61e-14!83;UBERON:0007282!2.61e-14!83;UBERON:0009618!2.61e-14!83;UBERON:0007285!2.61e-14!83;UBERON:0001134!7.39e-14!61;UBERON:0002036!7.39e-14!61;UBERON:0003082!7.39e-14!61;UBERON:0002385!3.47e-13!63;UBERON:0001015!3.47e-13!63;UBERON:0000383!3.47e-13!63;UBERON:0000486!1.86e-12!82;UBERON:0004290!2.55e-12!70;UBERON:0005256!8.32e-09!143;UBERON:0000490!5.14e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;6.09e-08;5!UBERON:0001533;6.09e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.83e-08,62;UBERON:0002036,5.83e-08,62;UBERON:0003082,5.83e-08,62;UBERON:0003834,8.04e-08,5;UBERON:0001533,8.04e-08,5;UBERON:0002385,1.11e-07,64;UBERON:0001015,1.11e-07,64;UBERON:0000383,1.11e-07,64;UBERON:0002329,8.04e-07,71;UBERON:0003059,8.04e-07,71;UBERON:0007282,8.04e-07,71;UBERON:0004290,8.04e-07,71;UBERON:0009618,8.04e-07,71 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.247532705920093,1.32558950291166,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.237093786023,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0,0,0,0,0.61246251376468,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0.460249493211497,0.161646056818812,0.355009592516614,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,2.17171960001369,0.205476322550383,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.831883446123229,2.67643483195743,1.57702415033935,0.702848489956279,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0.929691098594572,1.88887408098384,0.6970372701606,0,0,0,0,0,0,1.58189712359363,0.190630193923825,0.511795582622668,0,0,0,0,0,0.117812402345686,0.404364963146632,1.58510321173008,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,1.10273068709225,0,2.19225442626881,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,1.59847687665704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15149118391667,0,0,0,0,0,0.326587360109409,0,0,0.851940108927109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,1.10961172300523,0.947015026375446,1.25783950876288,0.889811221596536,1.37304041038154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0.928067519756987,0,0.800055529326307,0,0,2.52369796457302,0,0,0,0,0,0,17.9088841081487,0,0,0,0.38582807654183,0,0,0,0,0,0,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.40341013740704,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,3.52894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24263725161227,0,0.202117188958219,0,0,0,0,0,0,0.533636729388577,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr21:28941690..28941715,+ | |||
}} | }} |
Latest revision as of 17:07, 28 July 2015
Short description: | p@chr21:28941690..28941715, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:28941690..28941715, + |
Coexpression cluster: | C502_mesothelioma_Basophils_liposarcoma_Olfactory_Fibroblast_mesenchymal_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 2.55e-20 | 4 |
multinucleate cell | 5.79e-10 | 1 |
myotube | 5.79e-10 | 1 |
muscle precursor cell | 1.40e-08 | 58 |
myoblast | 1.40e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.40e-08 | 58 |
smooth muscle cell of the subclavian artery | 8.04e-08 | 5 |
receptor cell | 8.39e-07 | 6 |
sensory epithelial cell | 8.39e-07 | 6 |
olfactory epithelial cell | 8.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 5.83e-08 | 62 |
striated muscle tissue | 5.83e-08 | 62 |
myotome | 5.83e-08 | 62 |
thoracic segment blood vessel | 8.04e-08 | 5 |
subclavian artery | 8.04e-08 | 5 |
muscle tissue | 1.11e-07 | 64 |
musculature | 1.11e-07 | 64 |
musculature of body | 1.11e-07 | 64 |
somite | 8.04e-07 | 71 |
presomitic mesoderm | 8.04e-07 | 71 |
presumptive segmental plate | 8.04e-07 | 71 |
dermomyotome | 8.04e-07 | 71 |
trunk paraxial mesoderm | 8.04e-07 | 71 |