FFCP PHASE1:Hg19::chr7:55053327..55053342,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:55053327..55053342,+ | |||
|coexpression_cluster_id=C2898 | |coexpression_cluster_id=C2898 | ||
|description=CAGE_peak_at_chr7:55053327..55053342,+ | |description=CAGE_peak_at_chr7:55053327..55053342,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!6.11e-07!254 | |ontology_enrichment_celltype=CL:0000066!6.11e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000076;8.40e-07;63 | |ontology_enrichment_celltype_v019=CL:0000076;8.40e-07;63 | ||
|ontology_enrichment_celltype_v019_2=CL:0000076,2.87e-14,63 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.29e-13;2!UBERON:0010056;1.29e-13;2 | |ontology_enrichment_development_v019=UBERON:0008814;1.29e-13;2!UBERON:0010056;1.29e-13;2 | ||
|ontology_enrichment_disease=DOID:1749!3.60e-15!14;DOID:305!1.20e-11!106;DOID:0050687!1.45e-10!143;DOID:14566!1.33e-07!239;DOID:162!3.76e-07!235 | |ontology_enrichment_disease=DOID:1749!3.60e-15!14;DOID:305!1.20e-11!106;DOID:0050687!1.45e-10!143;DOID:14566!1.33e-07!239;DOID:162!3.76e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.50e-63;14!DOID:4556;1.19e-09;3 | |ontology_enrichment_disease_v019=DOID:1749;3.50e-63;14!DOID:4556;1.19e-09;3 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,3.14e-63,14;DOID:305,1.71e-11,106;DOID:4556,1.19e-09,3;DOID:0050687,1.66e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001264!3.32e-07!10;UBERON:0003922!3.32e-07!10;UBERON:0003923!3.32e-07!10;UBERON:0003924!3.32e-07!10;UBERON:0003921!3.32e-07!10;UBERON:0004119!3.46e-07!169;UBERON:0000925!3.46e-07!169;UBERON:0006595!3.46e-07!169 | |ontology_enrichment_uberon=UBERON:0001264!3.32e-07!10;UBERON:0003922!3.32e-07!10;UBERON:0003923!3.32e-07!10;UBERON:0003924!3.32e-07!10;UBERON:0003921!3.32e-07!10;UBERON:0004119!3.46e-07!169;UBERON:0000925!3.46e-07!169;UBERON:0006595!3.46e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;8.64e-26;1!UBERON:0005056;8.64e-26;1!UBERON:0004176;8.64e-26;1!UBERON:0003343;9.82e-26;4!UBERON:0004785;9.82e-26;4!UBERON:0000974;1.57e-17;6!UBERON:0001723;1.60e-09;3!UBERON:0001033;1.60e-09;3!UBERON:0003729;1.26e-08;13 | |ontology_enrichment_uberon_v019=UBERON:0000997;8.64e-26;1!UBERON:0005056;8.64e-26;1!UBERON:0004176;8.64e-26;1!UBERON:0003343;9.82e-26;4!UBERON:0004785;9.82e-26;4!UBERON:0000974;1.57e-17;6!UBERON:0001723;1.60e-09;3!UBERON:0001033;1.60e-09;3!UBERON:0003729;1.26e-08;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,5.93e-26,1;UBERON:0005056,5.93e-26,1;UBERON:0003343,8.66e-26,4;UBERON:0004785,8.66e-26,4;UBERON:0000974,5.98e-11,10;UBERON:0001723,1.54e-09,3;UBERON:0001033,1.54e-09,3;UBERON:0010056,1.54e-09,3;UBERON:0003729,1.22e-08,13 | |||
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| ||
|short_description=p@chr7:55053327..55053342,+ | |short_description=p@chr7:55053327..55053342,+ | ||
}} | }} |
Latest revision as of 10:47, 31 July 2015
Short description: | p@chr7:55053327..55053342, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:55053327..55053342, + |
Coexpression cluster: | C2898_oral_giant_large_epidermoid_squamous_embryonic_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 2.87e-14 | 63 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 5.93e-26 | 1 |
external female genitalia | 5.93e-26 | 1 |
mucosa of oral region | 8.66e-26 | 4 |
respiratory system mucosa | 8.66e-26 | 4 |
neck | 5.98e-11 | 10 |
tongue | 1.54e-09 | 3 |
gustatory system | 1.54e-09 | 3 |
future tongue | 1.54e-09 | 3 |
mouth mucosa | 1.22e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.14e-63 | 14 |
carcinoma | 1.71e-11 | 106 |
lung large cell carcinoma | 1.19e-09 | 3 |
cell type cancer | 1.66e-08 | 143 |