FFCP PHASE1:Hg19::chr16:22385954..22385965,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1039 | |EntrezGene=1039 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1799 | |HGNC=1799 | ||
|TSSclassifier=strong | |||
|UniProt=Q01850 | |UniProt=Q01850 | ||
|association_with_transcript=-16bp_to_ENST00000268383,NM_001802,uc002dkn.2_5end | |association_with_transcript=-16bp_to_ENST00000268383,NM_001802,uc002dkn.2_5end | ||
|cluster_id=chr16:22385954..22385965,- | |||
|description=CAGE_peak_2_at_CDR2_5end | |description=CAGE_peak_2_at_CDR2_5end | ||
|id=chr16:22385954..22385965,- | |id=chr16:22385954..22385965,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;4.41e-07;1!CL:0000511;4.41e-07;1!CL:0002625;4.41e-07;1!CL:0000222;4.41e-07;1!CL:0000342;4.41e-07;1!CL:0000557;4.41e-07;1!CL:0002565;4.41e-07;1!CL:0000216;4.41e-07;1 | |ontology_enrichment_celltype_v019=CL:0002032;4.41e-07;1!CL:0000511;4.41e-07;1!CL:0002625;4.41e-07;1!CL:0000222;4.41e-07;1!CL:0000342;4.41e-07;1!CL:0000557;4.41e-07;1!CL:0002565;4.41e-07;1!CL:0000216;4.41e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.37e-07,1;CL:0002625,2.37e-07,1;CL:0000216,2.37e-07,1;CL:0000342,9.18e-07,1;CL:0002565,9.18e-07,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.59e-07;1!UBERON:0005795;4.41e-07;1!UBERON:0007029;4.41e-07;1!UBERON:0001136;4.41e-07;1!UBERON:0001343;4.41e-07;1!UBERON:0002426;4.41e-07;1!UBERON:0003831;4.41e-07;1!UBERON:0003898;4.41e-07;1!UBERON:0004830;4.41e-07;1!UBERON:0003830;4.41e-07;1!UBERON:0005175;4.41e-07;1!UBERON:0001774;4.41e-07;1!UBERON:0004910;4.41e-07;1!UBERON:0002506;4.41e-07;1!UBERON:0004813;4.41e-07;1!UBERON:0001103;4.41e-07;1!UBERON:0001769;4.41e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0007195;1.59e-07;1!UBERON:0005795;4.41e-07;1!UBERON:0007029;4.41e-07;1!UBERON:0001136;4.41e-07;1!UBERON:0001343;4.41e-07;1!UBERON:0002426;4.41e-07;1!UBERON:0003831;4.41e-07;1!UBERON:0003898;4.41e-07;1!UBERON:0004830;4.41e-07;1!UBERON:0003830;4.41e-07;1!UBERON:0005175;4.41e-07;1!UBERON:0001774;4.41e-07;1!UBERON:0004910;4.41e-07;1!UBERON:0002506;4.41e-07;1!UBERON:0004813;4.41e-07;1!UBERON:0001103;4.41e-07;1!UBERON:0001769;4.41e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.65e-07,1;UBERON:0001136,2.37e-07,1;UBERON:0001343,2.37e-07,1;UBERON:0004910,2.37e-07,1;UBERON:0005154,2.37e-07,1;UBERON:0005295,2.37e-07,1;UBERON:0004813,2.37e-07,1;UBERON:0005297,2.37e-07,1;UBERON:0005294,2.37e-07,1;UBERON:0010141,2.37e-07,1;UBERON:0005891,2.37e-07,1;UBERON:0004871,2.47e-07,8;UBERON:0002426,2.52e-07,1;UBERON:0003831,2.52e-07,1;UBERON:0003898,2.52e-07,1;UBERON:0004830,2.52e-07,1;UBERON:0003830,2.52e-07,1;UBERON:0005175,2.52e-07,1;UBERON:0001774,2.52e-07,1;UBERON:0001103,2.52e-07,1;UBERON:0010084,2.52e-07,1;UBERON:0007029,2.84e-07,1;UBERON:0002506,9.18e-07,1;UBERON:0001769,9.18e-07,1 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0.446961094427288,0,2.53299878168311,0,0,0,0,0.218441372130172,0,0.247532705920093,0,0.672325146451775,0.602694528023977,0,0,0.246242116153576,0.612002073732759,0,0,0.547497700291537,0.753255837568817,0.458480434487708,0.656804715599566,0.472264687882075,0,0,0.154816123316076,1.83884244895785,0,0.369754010166788,0.154934401160603,0.284338464974843,0,0,0,0,0.447830948479849,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.590129310341499,0.786021525498329,0.616804496998528,0,0.977766799900771,0,0,0.222820913770347,0.294605907474837,0.443067789167242,0,0.128091319725675,0.390178042679635,0.164437904603676,0.276350017785848,0,0.296573126324121,0,0,0.113309342697566,0.383220493601921,0.68725489096526,0.253019692019503,0.637130828648193,0.651083453856419,0.950452044448374,0.150575119077773,0.639933055772092,0,0.236777252044017,0.821127996921047,0.604820229674197,0,0.724122019413995,0,0,0.639312809217652,0.722878304769133,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,1.11332214173056,0.364295288292542,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0,1.06729878806013,0.33472061276467,0,0,0,0.735326160691737,0.81014194788176,0.357198913136319,0.22452937262617,0.450445921933289,0,0,0.916008719652036,1.31780417436063,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0,0,0.560677600142307,0,0.24666754841716,0.622422070799533,0.269421344139376,0.490385709340376,0.454072282934794,0,0.468642863667593,1.24864030732128,0,0.149448680551801,0.469737994575059,0.647491777472526,0,0,0.368502951935304,0.309977343527296,0,0.494533858557114,0,0,0.336672227908132,0.375355559615893,0,0.438977620880838,0.30648779579902,0.600952235626387,0.340296549480063,0.179389635688862,0,0.211931901159562,0.600182192168805,0.515262646192195,0,0.18611685633159,0.337552664482532,0.584622030967192,0.757301322732344,0.368199594569197,0.646584227275248,0,0.403008392910561,0.339121184620975,0,0,0.573609190778008,0.243947412259191,0.662648841607426,0.348581828608555,0.207322110030741,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0.134831308160164,0,0,0.738155454624648,1.40241773803446,0.4115740113314,0,0,1.96565443335525,0.590789906681404,0,0,1.02940686179115,0.109750285408626,0,0.301586917234893,0.0925884451585296,0,0,0,0.579652024875384,0.587043471179108,0.433099343283221,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0.425325291727159,0.358234090811393,0.290633938513962,0,0,0.44024217006613,0.621984346622316,1.00883967391873,0.75745460055828,0.507983154337352,0,0,0,0.205654985406647,0,0.571652865261156,0.448524337381443,1.30788020649984,0.22001485746285,0.129271715757778,0,0,0.797814349754612,0,0.257207374262142,0,0,0.428933980974443,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0.434343920002738,0,0.895304816199478,0.112085143993527,0,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0.415941723061614,0,0.157702415033935,0.35142424497814,0,0,3.10419213877515,1.32845119707087,0.553107505625109,0.347534457872331,0,0,0.206768026122887,0.647142602455851,0.320182673410333,0,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0.128139149255701,1.02341449813341,0,0,0,0.355123450626254,0.246381468041427,0.519254429183621,0.464841513839837,0.120859449591622,0.200506470303285,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0.15403067420883,0,1.46139224653261,0,1.13733384070897,0,0,0,0.541892875087706,0.501689773854853,0.509752546090077,0,0.447749509444357,0.657779629937804,0.522870902049801,0.512900250232778,0.656029291399411,0,0.206082023295445,0.366277859273374,0.165018999841176,0.574265537996172,0,1.6068392984416,0.096670718292122,0.154048617114644,0.460511024178389,0.137836572484531,0.214840489736547,0.435050081742686,0.255679882248303,0,0,0.192190067365106,0.638063562472921,0.50578890427775,0.464845549297286,0.31481234683064,0.6970372701606,0,1.06461206063404,0,0.18532421910392,0.143124886741991,0,1.2655176988749,0.38126038784765,0,0.42793898803392,0.318203247925937,0,0.359744915166629,0.274537029736055,0.589062011728432,0.202182481573316,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0.272999822815972,0.424216295861138,0,0,0,0,0,0.655894752046633,0.405820753925408,0.30982349809975,0.563391205064483,0.573645408816206,1.17898849215745,0.35667105148125,0.354761064070598,0.844430541190656,0,0.379473173765715,0,0,0,0,0,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0.648473311192717,0,0,0.320472213382419,0,0.245040215981032,0.557409525377156,0.144269212976445,0.284567373393656,0.637705090915289,0.59873811429845,0,0,0,0,0,0.156679895773023,0,0,0.321176150207399,0,0,0,0,0,0.333698283423817,0.19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| ||
|short_description=p2@CDR2 | |short_description=p2@CDR2 | ||
}} | }} |
Latest revision as of 05:13, 25 September 2015
Short description: | p2@CDR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000268383, NM_001802, uc002dkn.2_5end |
EntrezGene: | CDR2 |
HGNC: | 1799 |
UniProt: | Q01850 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.37e-07 | 1 |
seminiferous tubule epithelial cell | 2.37e-07 | 1 |
Sertoli cell | 2.37e-07 | 1 |
pigment cell (sensu Vertebrata) | 9.18e-07 | 1 |
iris pigment epithelial cell | 9.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.65e-07 | 1 |
mesothelium | 2.37e-07 | 1 |
seminiferous tubule of testis | 2.37e-07 | 1 |
epithelium of male gonad | 2.37e-07 | 1 |
epithelial cord | 2.37e-07 | 1 |
sex cord | 2.37e-07 | 1 |
seminiferous tubule epithelium | 2.37e-07 | 1 |
testis sex cord | 2.37e-07 | 1 |
genital ridge | 2.37e-07 | 1 |
primitive sex cord of indifferent gonad | 2.37e-07 | 1 |
coelomic epithelium | 2.37e-07 | 1 |
somatic layer of lateral plate mesoderm | 2.47e-07 | 8 |
chest muscle | 2.52e-07 | 1 |
respiratory system muscle | 2.52e-07 | 1 |
skeletal muscle of trunk | 2.52e-07 | 1 |
respiratory system skeletal muscle | 2.52e-07 | 1 |
thoracic segment muscle | 2.52e-07 | 1 |
chest organ | 2.52e-07 | 1 |
muscle of trunk | 2.52e-07 | 1 |
diaphragm | 2.52e-07 | 1 |
future diaphragm | 2.52e-07 | 1 |
surface | 2.84e-07 | 1 |
iris epithelium | 9.18e-07 | 1 |
iris | 9.18e-07 | 1 |