FFCP PHASE1:Hg19::chr12:67251332..67251336,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:67251332..67251336,- | |||
|description=CAGE_peak_at_chr12:67251332..67251336,- | |description=CAGE_peak_at_chr12:67251332..67251336,- | ||
|id=chr12:67251332..67251336,- | |id=chr12:67251332..67251336,- | ||
|ontology_enrichment_celltype=CL:0000047!3.60e-07!8 | |ontology_enrichment_celltype=CL:0000047!3.60e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000167;5.53e-10;1!CL:0000164;5.53e-10;1!CL:0000502;5.53e-10;1!CL:0000172;5.53e-10;1!CL:0000173;5.53e-10;1 | |ontology_enrichment_celltype_v019=CL:0000167;5.53e-10;1!CL:0000164;5.53e-10;1!CL:0000502;5.53e-10;1!CL:0000172;5.53e-10;1!CL:0000173;5.53e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.57e-10,8;CL:0000167,8.99e-10,1;CL:0000164,8.99e-10,1;CL:0000502,8.99e-10,1;CL:0000172,8.99e-10,1;CL:0000173,8.99e-10,1;CL:0002351,8.99e-10,1;CL:0000540,9.15e-07,6;CL:0000031,9.15e-07,6;CL:0000404,9.15e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.80e-10;1!CL:0002351;5.53e-10;1!UBERON:0003124;5.53e-10;1 | |ontology_enrichment_development_v019=UBERON:0005754;1.80e-10;1!CL:0002351;5.53e-10;1!UBERON:0003124;5.53e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;2.16e-10;1!DOID:10165;2.16e-10;1!DOID:1798;2.16e-10;1!DOID:4430;5.53e-10;1!DOID:170;8.50e-07;6 | |ontology_enrichment_disease_v019=DOID:1799;2.16e-10;1!DOID:10165;2.16e-10;1!DOID:1798;2.16e-10;1!DOID:4430;5.53e-10;1!DOID:170;8.50e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,1.98e-10,1;DOID:10165,1.98e-10,1;DOID:1798,1.98e-10,1;DOID:4430,8.99e-10,1;DOID:170,8.39e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002020!8.01e-18!34;UBERON:0003528!8.01e-18!34;UBERON:0001017!2.38e-17!82;UBERON:0001869!3.60e-16!32;UBERON:0001893!6.00e-16!34;UBERON:0005743!7.64e-16!86;UBERON:0002791!2.26e-15!33;UBERON:0001049!5.03e-15!57;UBERON:0005068!5.03e-15!57;UBERON:0006241!5.03e-15!57;UBERON:0007135!5.03e-15!57;UBERON:0000073!1.21e-14!94;UBERON:0001016!1.21e-14!94;UBERON:0002780!3.74e-14!41;UBERON:0001890!3.74e-14!41;UBERON:0006240!3.74e-14!41;UBERON:0003080!1.33e-13!42;UBERON:0002346!2.02e-12!90;UBERON:0000956!2.58e-12!25;UBERON:0000203!2.58e-12!25;UBERON:0000955!2.96e-12!69;UBERON:0006238!2.96e-12!69;UBERON:0002616!3.37e-12!59;UBERON:0002619!4.08e-12!22;UBERON:0003075!4.41e-12!86;UBERON:0007284!4.41e-12!86;UBERON:0007023!8.29e-12!115;UBERON:0003056!7.71e-11!61;UBERON:0000924!1.13e-10!173;UBERON:0006601!1.13e-10!173;UBERON:0004121!2.67e-10!169;UBERON:0001950!3.18e-10!20;UBERON:0000033!3.03e-08!123;UBERON:0000153!7.95e-08!129;UBERON:0007811!7.95e-08!129;UBERON:0002308!4.04e-07!9;UBERON:0000125!4.04e-07!9 | |ontology_enrichment_uberon=UBERON:0002020!8.01e-18!34;UBERON:0003528!8.01e-18!34;UBERON:0001017!2.38e-17!82;UBERON:0001869!3.60e-16!32;UBERON:0001893!6.00e-16!34;UBERON:0005743!7.64e-16!86;UBERON:0002791!2.26e-15!33;UBERON:0001049!5.03e-15!57;UBERON:0005068!5.03e-15!57;UBERON:0006241!5.03e-15!57;UBERON:0007135!5.03e-15!57;UBERON:0000073!1.21e-14!94;UBERON:0001016!1.21e-14!94;UBERON:0002780!3.74e-14!41;UBERON:0001890!3.74e-14!41;UBERON:0006240!3.74e-14!41;UBERON:0003080!1.33e-13!42;UBERON:0002346!2.02e-12!90;UBERON:0000956!2.58e-12!25;UBERON:0000203!2.58e-12!25;UBERON:0000955!2.96e-12!69;UBERON:0006238!2.96e-12!69;UBERON:0002616!3.37e-12!59;UBERON:0002619!4.08e-12!22;UBERON:0003075!4.41e-12!86;UBERON:0007284!4.41e-12!86;UBERON:0007023!8.29e-12!115;UBERON:0003056!7.71e-11!61;UBERON:0000924!1.13e-10!173;UBERON:0006601!1.13e-10!173;UBERON:0004121!2.67e-10!169;UBERON:0001950!3.18e-10!20;UBERON:0000033!3.03e-08!123;UBERON:0000153!7.95e-08!129;UBERON:0007811!7.95e-08!129;UBERON:0002308!4.04e-07!9;UBERON:0000125!4.04e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.60e-13;3!UBERON:0004054;4.60e-13;3!UBERON:0000998;1.80e-10;1!UBERON:0006868;1.80e-10;1!UBERON:0001000;2.16e-10;1!UBERON:0005352;2.16e-10;1!UBERON:0005904;5.07e-10;4!UBERON:0007195;5.53e-10;1!UBERON:0001872;4.85e-08;5!UBERON:0000922;3.60e-07;49!UBERON:0001950;7.36e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0006947;4.60e-13;3!UBERON:0004054;4.60e-13;3!UBERON:0000998;1.80e-10;1!UBERON:0006868;1.80e-10;1!UBERON:0001000;2.16e-10;1!UBERON:0005352;2.16e-10;1!UBERON:0005904;5.07e-10;4!UBERON:0007195;5.53e-10;1!UBERON:0001872;4.85e-08;5!UBERON:0000922;3.60e-07;49!UBERON:0001950;7.36e-07;20 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.61e-13,3;UBERON:0004054,4.61e-13,3;UBERON:0000998,1.80e-10,1;UBERON:0006868,1.80e-10,1;UBERON:0001000,2.16e-10,1;UBERON:0005352,2.16e-10,1;UBERON:0005904,5.08e-10,4;UBERON:0007195,9.82e-10,1;UBERON:0001017,5.02e-09,81;UBERON:0001872,5.12e-08,5;UBERON:0001016,5.42e-08,89;UBERON:0001950,7.43e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.443458794925128,0.43917392846563,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.57978255948989,0,0,0.365921118388786,0.662648841607426,0.116193942869518,0.10366105501537,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,2.60279707715243,1.54657762555539,0.502548796003046,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0.111308705022906,0,0.211125408127993,0,0.828851746593443,0.251932747854276,0,0,0,0,0.179021174675609,0,0.197286811273867,0,1.11136990144637,0,0,1.99613798001194,1.04171104434093,0.174919999992391,0,0,0,0,0.689486746482929,0.583209226766509,0,0,1.80894657938112,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0.69169171316418,0.269272933229316,0.217294743844016,0.31900115973192,0,0,0,0,0,0.676786981851542,0.392125068635479,0.167821586975843,0,0,0,0.489698424477443,0,0,0,0.265372693510018,0,0.296521128680622,0,0,0,0.802577647298789,0,0,0,0,2.76209081994573,0,1.22429104652196,0.063186579628488,0.60129367765797,0.207376382794494,0,0.330991955875499,0,1.19472429772959,0.284609546029793,0,0.173559738335131,0.489961987071888,0.0870592065804026,0.873633341210151,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.253243183823515,0.391102765469606,0.0801588202515337,0,0.599428828746391,0,0,0.171594997861965,0,0.248505071130865,0.471388069233591,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.953423842781029,0.482259445395058,0.412618309791701,0,0,0.77380195455795,0.364497339948148,0,0.315222829196793,0.157363764404994,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.39669780522807,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.244052529803926,0.625954653532499,0.573409195690071,0.332787154610557,0.0620964029413835,0.691743174681154,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450772826991655,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,1.50109113962448,0,0.226705925512272,0.231522474323834,0.734210113519403,0,0,0.438568099157414,0,0.38582807654183,0.337884881306145,0,0,0,0.691292180758654,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0.255788742607303,0,0.471797825567689,0,0,0.212574920101683,0.247871528518004,0,0,0.157723490002507,0,0,0,0.192687675289379,0,0.478901577171454,0.615349092722265,1.76450187355203,0.138314504928436,0.484426936895553,0,0,0,0,0.115525666150338,0,0,0,0,0,0,2.88097363929565,0,0,0.202612753855184,0,1.2401207790071,0.126831620387814,6.01672289920042,0,0.992422356778588,0,0.127762427639595,0.535701835878287,0,0,0,1.86274977341542,0,0,0.135939465953663,0.197318320688547,0,0.333694205676207,0.078493092850514,0.628462359664008,0,1.82631744101899,0,0,0,1.58013611732727,0.464965701472501,0,0,0.207216164163037,0.3414369541879,0,0,0,0,3.38709640152743,0.22910686854405,0,0,0.335566295393377,0,0,0,0,0,0.485710993059139,0.233939463462106,1.19370465096821,0.475680363110274,0.11294608203896,0.109940516745429,0,0.231522474323834,0.437119121007915,0,0.735444965261716,1.17838273550813,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0.458729283404541,0.143339583151451,0,0.203974470572744,1.74540276136151,0.5290268405154,0,0,0,0,0.218531143927391,0.126698501011437,0.101988829741982,0,0.18378979906969,0,0,0.267964130156178,0,0.20686599172379,0,0.476128862927481,0,0,0,0.12729431655633,0.606351566874658,0.435433495793923,0,0.0673520530145875,0.21516661617802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| ||
|short_description=p@chr12:67251332..67251336,- | |short_description=p@chr12:67251332..67251336,- | ||
}} | }} |
Latest revision as of 11:34, 24 July 2015
Short description: | p@chr12:67251332..67251336, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:67251332..67251336, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.57e-10 | 8 |
peptide hormone secreting cell | 8.99e-10 | 1 |
enteroendocrine cell | 8.99e-10 | 1 |
type D enteroendocrine cell | 8.99e-10 | 1 |
somatostatin secreting cell | 8.99e-10 | 1 |
pancreatic D cell | 8.99e-10 | 1 |
progenitor cell of endocrine pancreas | 8.99e-10 | 1 |
neuron | 9.15e-07 | 6 |
neuroblast | 9.15e-07 | 6 |
electrically signaling cell | 9.15e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 4.61e-13 | 3 |
internal male genitalia | 4.61e-13 | 3 |
seminal vesicle | 1.80e-10 | 1 |
seminal fluid secreting gland | 1.80e-10 | 1 |
vas deferens | 2.16e-10 | 1 |
spermatic cord | 2.16e-10 | 1 |
duct of male reproductive system | 5.08e-10 | 4 |
stroma of bone marrow | 9.82e-10 | 1 |
central nervous system | 5.02e-09 | 81 |
parietal lobe | 5.12e-08 | 5 |
nervous system | 5.42e-08 | 89 |
neocortex | 7.43e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.98e-10 | 1 |
endocrine pancreas cancer | 1.98e-10 | 1 |
pancreatic endocrine carcinoma | 1.98e-10 | 1 |
somatostatinoma | 8.99e-10 | 1 |
endocrine gland cancer | 8.39e-07 | 6 |