FFCP PHASE1:Hg19::chr14:52021357..52021368,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122786 | |EntrezGene=122786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |HGNC=19839 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000555952_5end | |association_with_transcript=-9bp_to_ENST00000555952_5end | ||
|cluster_id=chr14:52021357..52021368,+ | |||
|coexpression_cluster_id=C2298 | |coexpression_cluster_id=C2298 | ||
|description=CAGE_peak_13_at_FRMD6_5end | |description=CAGE_peak_13_at_FRMD6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000055!2.26e-15!180;CL:0000548!5.45e-08!679;CL:0000004!5.45e-08!679;CL:0000255!5.45e-08!679;CL:0000012!8.73e-08!682;CL:0000057!1.59e-07!75;CL:0000220!2.27e-07!246;CL:0000680!3.21e-07!57;CL:0000056!3.21e-07!57;CL:0000355!3.21e-07!57;CL:0002321!3.50e-07!248;CL:0000077!9.44e-07!19 | |ontology_enrichment_celltype=CL:0000055!2.26e-15!180;CL:0000548!5.45e-08!679;CL:0000004!5.45e-08!679;CL:0000255!5.45e-08!679;CL:0000012!8.73e-08!682;CL:0000057!1.59e-07!75;CL:0000220!2.27e-07!246;CL:0000680!3.21e-07!57;CL:0000056!3.21e-07!57;CL:0000355!3.21e-07!57;CL:0002321!3.50e-07!248;CL:0000077!9.44e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.24e-08;3!CL:0000077;2.09e-07;19!CL:0000319;7.08e-07;1 | |ontology_enrichment_celltype_v019=CL:0002541;1.24e-08;3!CL:0000077;2.09e-07;19!CL:0000319;7.08e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.09e-09,3;CL:0000077,1.75e-07,19;CL:0000319,6.49e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.36e-11;5 | |ontology_enrichment_development_v019=UBERON:0007123;5.36e-11;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:201;1.87e-09;6!DOID:0060100;1.87e-09;6!DOID:3111;1.64e-07;1!DOID:3603;1.64e-07;1!DOID:0060085;2.59e-07;1!DOID:3165;2.59e-07;1!DOID:0060121;2.59e-07;1!DOID:2438;2.59e-07;1!DOID:4418;2.59e-07;1!DOID:1115;2.70e-07;20!DOID:3347;3.60e-07;1!DOID:3030;7.08e-07;1!DOID:3112;7.08e-07;1 | |ontology_enrichment_disease_v019=DOID:201;1.87e-09;6!DOID:0060100;1.87e-09;6!DOID:3111;1.64e-07;1!DOID:3603;1.64e-07;1!DOID:0060085;2.59e-07;1!DOID:3165;2.59e-07;1!DOID:0060121;2.59e-07;1!DOID:2438;2.59e-07;1!DOID:4418;2.59e-07;1!DOID:1115;2.70e-07;20!DOID:3347;3.60e-07;1!DOID:3030;7.08e-07;1!DOID:3112;7.08e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:201,1.72e-09,6;DOID:0060100,1.72e-09,6;DOID:3111,1.65e-07,1;DOID:3603,1.65e-07,1;DOID:1115,2.59e-07,20;DOID:0060085,2.84e-07,1;DOID:3165,2.84e-07,1;DOID:0060121,2.84e-07,1;DOID:2438,2.84e-07,1;DOID:4418,2.84e-07,1;DOID:3347,3.01e-07,1;DOID:3112,4.85e-07,1;DOID:3030,6.49e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000490!6.41e-07!138 | |ontology_enrichment_uberon=UBERON:0000490!6.41e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;5.36e-11;5!UBERON:0003124;1.24e-08;3!UBERON:0000920;1.24e-08;3!UBERON:0007195;7.08e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0002046;5.36e-11;5!UBERON:0003124;1.24e-08;3!UBERON:0000920;1.24e-08;3!UBERON:0007195;7.08e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,4.36e-11,5;UBERON:0004117,4.36e-11,5;UBERON:0007689,4.36e-11,5;UBERON:0007123,4.36e-11,5;UBERON:0003091,4.36e-11,5;UBERON:0000920,9.09e-09,3;UBERON:0007195,9.18e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0.655324116390517,0.263766978228454,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0.25326102332916,1.32409180813219,0,0,1.12135520028461,0,0.74000264525148,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0,0,0,0.554128230968366,0,0,0.300476117813194,0.453728732640084,0.179389635688862,0.213557388818567,0.423863802319124,0,0,0,0.37223371266318,0.337552664482532,0,0.757301322732344,0.736399189138395,0,0,0.604512589365842,0.339121184620975,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.2933531432838,0.258543431515556,0,0,0,1.04007436911366,0.257207374262142,0,0,0,0,0,1.30294473717494,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.723906533337896,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.585707074963566,0,0,0,0,0.184369168541703,0.521301686808497,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,1.02341449813341,0.160853921143607,0,0,0.177561725313127,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0.459257792658427,0.728364672026868,0.262248829918848,0.902399225814824,0.924184045252977,0,0,1.26661954671451,0,0,1.29549549661284,0,0,0,0,0,0.671624264166535,0,0,0.256450125116389,0,0,0,0.915694648183434,0.082509499920588,0,0,0,0,0,0,0.413509717453592,0.107420244868274,0.145016693914229,0.255679882248303,0,0,0,0,0,0,0,0,0,1.06461206063404,0,0.18532421910392,0.286249773483982,0,0.632758849437452,0.190630193923825,0.255897791311334,0,0,0,0.539617372749944,0,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,1.62328301570163,0.30982349809975,0,0.143411352204052,0.196498082026242,0.7133421029625,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,3.7844959707788,0,0,0,0,0,0.511343412510774,0,0.622079175323615,2.69605053441981,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91153644677601,0,0,0,1.91400695839152,3.84709892287822,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627865836814451,0,0,0.277349346026277,0,0,7.40003255933422,0,0,0,0,0.0821154570532092,0,0,0,2.60379656828827,3.7755776223568,0,0,2.24444696704294,0,0,0,0,0,0.288109595976299,0.99402028452346,0,0.543616824294456,0.523014231561666,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,12.6664030230834,0,0,0,0.542999601753713,0,0.326587360109409,2.39460383124975,0,6.3043568060606,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0.15543720058278,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0,0,4.00027764663154,0,0,0,0.192619830407303,0,0.260994291965212,0.906823702049089,1.62065732026684,1.71315693154527,12.1780411935411,0,0.438568099157414,4.59391779459291,1.73622634443823,0.168942440653073,0,0,0.911579868532147,0,0,0,0,0.655219697692825,1.47463745252232,8.66379705770371,0,0,0,3.97261167496785,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0.762764190934334,2.7614397042404,0,0,6.65626726721616,0,0,1.80149109261106,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0.444925607568277,0,0,0,0,2.15927591218621,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4669009767735,0,0,0,0,0,0,0,0,0.853818767021724,0,0,0,0,0,0,0,0 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| ||
|short_description=p13@FRMD6 | |short_description=p13@FRMD6 | ||
}} | }} |
Latest revision as of 04:58, 20 September 2015
Short description: | p13@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_FRMD6_5end |
Coexpression cluster: | C2298_pagetoid_liposarcoma_mesothelioma_mucinous_epidermoid_large_bile |
Association with transcript: | -9bp_to_ENST00000555952_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.09e-09 | 3 |
mesothelial cell | 1.75e-07 | 19 |
mucus secreting cell | 6.49e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 4.36e-11 | 5 |
pharyngeal pouch | 4.36e-11 | 5 |
thyroid diverticulum | 4.36e-11 | 5 |
pharyngeal pouch 2 | 4.36e-11 | 5 |
thyroid primordium | 4.36e-11 | 5 |
egg chorion | 9.09e-09 | 3 |
stroma of bone marrow | 9.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 1.72e-09 | 6 |
musculoskeletal system cancer | 1.72e-09 | 6 |
cystadenocarcinoma | 1.65e-07 | 1 |
mucinous cystadenocarcinoma | 1.65e-07 | 1 |
sarcoma | 2.59e-07 | 20 |
organ system benign neoplasm | 2.84e-07 | 1 |
skin benign neoplasm | 2.84e-07 | 1 |
integumentary system benign neoplasm | 2.84e-07 | 1 |
dermis tumor | 2.84e-07 | 1 |
cutaneous fibrous histiocytoma | 2.84e-07 | 1 |
osteosarcoma | 3.01e-07 | 1 |
papillary adenocarcinoma | 4.85e-07 | 1 |
mucinous adenocarcinoma | 6.49e-07 | 1 |