FFCP PHASE1:Hg19::chr12:49311920..49311942,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85478 | |EntrezGene=85478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29937 | |HGNC=29937 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000552188_5end | |association_with_transcript=0bp_to_ENST00000552188_5end | ||
|cluster_id=chr12:49311920..49311942,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_2_at_CCDC65_5end | |description=CAGE_peak_2_at_CCDC65_5end | ||
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|ontology_enrichment_celltype=CL:0000791!4.10e-32!18;CL:0000789!4.10e-32!18;CL:0002420!4.10e-32!18;CL:0002419!4.10e-32!18;CL:0000790!4.10e-32!18;CL:0000838!1.64e-29!52;CL:0000084!4.39e-29!25;CL:0000827!4.39e-29!25;CL:0000542!9.48e-29!53;CL:0000051!9.48e-29!53;CL:0000625!1.00e-20!11;CL:0000037!1.33e-18!172;CL:0000566!1.33e-18!172;CL:0000738!2.74e-18!140;CL:0000988!1.10e-16!182;CL:0002032!1.93e-15!165;CL:0000837!1.93e-15!165;CL:0002087!2.39e-15!119;CL:0002031!2.78e-12!124;CL:0000624!1.05e-11!6;CL:0000898!6.36e-07!3 | |ontology_enrichment_celltype=CL:0000791!4.10e-32!18;CL:0000789!4.10e-32!18;CL:0002420!4.10e-32!18;CL:0002419!4.10e-32!18;CL:0000790!4.10e-32!18;CL:0000838!1.64e-29!52;CL:0000084!4.39e-29!25;CL:0000827!4.39e-29!25;CL:0000542!9.48e-29!53;CL:0000051!9.48e-29!53;CL:0000625!1.00e-20!11;CL:0000037!1.33e-18!172;CL:0000566!1.33e-18!172;CL:0000738!2.74e-18!140;CL:0000988!1.10e-16!182;CL:0002032!1.93e-15!165;CL:0000837!1.93e-15!165;CL:0002087!2.39e-15!119;CL:0002031!2.78e-12!124;CL:0000624!1.05e-11!6;CL:0000898!6.36e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.56e-54;18!CL:0000789;7.56e-54;18!CL:0002419;7.56e-54;18!CL:0000084;7.48e-42;25!CL:0000625;5.31e-38;11!CL:0000624;8.39e-21;6!CL:0000542;1.20e-14;53!CL:0000898;9.09e-12;3!CL:0000623;6.61e-11;3!CL:0000226;2.48e-10;3!CL:0000842;2.48e-10;3!CL:0000767;3.40e-10;3!CL:0000815;2.54e-08;2!CL:0000792;2.54e-08;2!CL:0002677;2.54e-08;2 | |ontology_enrichment_celltype_v019=CL:0000791;7.56e-54;18!CL:0000789;7.56e-54;18!CL:0002419;7.56e-54;18!CL:0000084;7.48e-42;25!CL:0000625;5.31e-38;11!CL:0000624;8.39e-21;6!CL:0000542;1.20e-14;53!CL:0000898;9.09e-12;3!CL:0000623;6.61e-11;3!CL:0000226;2.48e-10;3!CL:0000842;2.48e-10;3!CL:0000767;3.40e-10;3!CL:0000815;2.54e-08;2!CL:0000792;2.54e-08;2!CL:0002677;2.54e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.22e-54,18;CL:0000789,8.22e-54,18;CL:0002420,8.22e-54,18;CL:0002419,8.22e-54,18;CL:0000790,8.22e-54,18;CL:0000084,8.26e-42,25;CL:0000827,8.26e-42,25;CL:0000625,5.70e-38,11;CL:0000838,4.35e-27,52;CL:0000542,1.82e-26,53;CL:0000051,1.82e-26,53;CL:0000624,8.54e-21,6;CL:0000738,2.50e-17,136;CL:0002087,5.12e-16,115;CL:0000037,1.45e-12,168;CL:0000898,9.76e-12,3;CL:0000988,1.53e-11,177;CL:0002031,1.78e-11,120;CL:0000623,6.84e-11,3;CL:0000825,6.84e-11,3;CL:0002032,1.96e-10,161;CL:0000837,1.96e-10,161;CL:0000226,2.70e-10,3;CL:0000842,2.70e-10,3;CL:0000767,3.40e-10,3;CL:0000815,2.63e-08,2;CL:0000792,2.63e-08,2;CL:0002677,2.63e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;7.56e-54;18!CL:0000051;1.20e-14;53 | |ontology_enrichment_development_v019=CL:0000790;7.56e-54;18!CL:0000051;1.20e-14;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.23e-15!15;UBERON:0000179!1.23e-15!15;UBERON:0000463!1.23e-15!15 | |ontology_enrichment_uberon=UBERON:0000178!1.23e-15!15;UBERON:0000179!1.23e-15!15;UBERON:0000463!1.23e-15!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.40e-29;15!UBERON:0000179;2.40e-29;15!UBERON:0000463;2.40e-29;15!UBERON:0002390;8.39e-12;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.40e-29;15!UBERON:0000179;2.40e-29;15!UBERON:0000463;2.40e-29;15!UBERON:0002390;8.39e-12;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.34e-29,15;UBERON:0000179,2.34e-29,15;UBERON:0000463,2.34e-29,15 | |||
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| ||
|short_description=p2@CCDC65 | |short_description=p2@CCDC65 | ||
}} | }} |
Latest revision as of 14:39, 18 September 2015
Short description: | p2@CCDC65 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC65_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000552188_5end |
EntrezGene: | CCDC65 |
HGNC: | 29937 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.22e-54 | 18 |
alpha-beta T cell | 8.22e-54 | 18 |
immature T cell | 8.22e-54 | 18 |
mature T cell | 8.22e-54 | 18 |
immature alpha-beta T cell | 8.22e-54 | 18 |
T cell | 8.26e-42 | 25 |
pro-T cell | 8.26e-42 | 25 |
CD8-positive, alpha-beta T cell | 5.70e-38 | 11 |
lymphoid lineage restricted progenitor cell | 4.35e-27 | 52 |
lymphocyte | 1.82e-26 | 53 |
common lymphoid progenitor | 1.82e-26 | 53 |
CD4-positive, alpha-beta T cell | 8.54e-21 | 6 |
leukocyte | 2.50e-17 | 136 |
nongranular leukocyte | 5.12e-16 | 115 |
hematopoietic stem cell | 1.45e-12 | 168 |
naive T cell | 9.76e-12 | 3 |
hematopoietic cell | 1.53e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 1.78e-11 | 120 |
natural killer cell | 6.84e-11 | 3 |
pro-NK cell | 6.84e-11 | 3 |
hematopoietic oligopotent progenitor cell | 1.96e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-10 | 161 |
single nucleate cell | 2.70e-10 | 3 |
mononuclear cell | 2.70e-10 | 3 |
basophil | 3.40e-10 | 3 |
regulatory T cell | 2.63e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.63e-08 | 2 |
naive regulatory T cell | 2.63e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.34e-29 | 15 |
haemolymphatic fluid | 2.34e-29 | 15 |
organism substance | 2.34e-29 | 15 |