FFCP PHASE1:Hg19::chr6:134498969..134499006,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6446 | |EntrezGene=6446 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10810 | |HGNC=10810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000525700,ENST00000532021_5end | |association_with_transcript=0bp_to_ENST00000525700,ENST00000532021_5end | ||
|cluster_id=chr6:134498969..134499006,- | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_2_at_SGK1_5end | |description=CAGE_peak_2_at_SGK1_5end | ||
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|ontology_enrichment_celltype=CL:0000766!5.41e-28!76;CL:0002194!1.95e-27!63;CL:0000576!1.95e-27!63;CL:0000040!1.95e-27!63;CL:0000559!1.95e-27!63;CL:0002009!8.70e-27!65;CL:0000557!1.37e-26!71;CL:0000839!3.15e-26!70;CL:0000860!3.88e-26!45;CL:0002057!3.65e-24!42;CL:0000763!4.03e-10!112;CL:0000049!4.03e-10!112;CL:0000048!6.69e-10!430;CL:0000723!4.96e-09!436;CL:0000034!5.71e-08!444;CL:0000235!1.12e-07!10 | |ontology_enrichment_celltype=CL:0000766!5.41e-28!76;CL:0002194!1.95e-27!63;CL:0000576!1.95e-27!63;CL:0000040!1.95e-27!63;CL:0000559!1.95e-27!63;CL:0002009!8.70e-27!65;CL:0000557!1.37e-26!71;CL:0000839!3.15e-26!70;CL:0000860!3.88e-26!45;CL:0002057!3.65e-24!42;CL:0000763!4.03e-10!112;CL:0000049!4.03e-10!112;CL:0000048!6.69e-10!430;CL:0000723!4.96e-09!436;CL:0000034!5.71e-08!444;CL:0000235!1.12e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.72e-21;39!CL:0000234;1.72e-21;39!CL:0000860;2.82e-21;33!CL:0002057;2.82e-21;33!CL:0000576;1.07e-17;48!CL:0000766;7.54e-15;69 | |ontology_enrichment_celltype_v019=CL:0000473;1.72e-21;39!CL:0000234;1.72e-21;39!CL:0000860;2.82e-21;33!CL:0002057;2.82e-21;33!CL:0000576;1.07e-17;48!CL:0000766;7.54e-15;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.02e-32,48;CL:0000234,1.02e-32,48;CL:0000766,2.13e-28,72;CL:0000860,3.25e-28,42;CL:0002057,3.25e-28,42;CL:0002194,1.75e-27,59;CL:0000576,1.75e-27,59;CL:0000040,1.75e-27,59;CL:0000559,1.75e-27,59;CL:0000557,2.45e-27,67;CL:0002009,5.06e-27,61;CL:0000839,6.48e-27,66;CL:0000763,8.04e-12,108;CL:0000049,8.04e-12,108;CL:0000048,1.77e-09,427;CL:0000723,1.19e-08,433;CL:0000034,6.05e-08,441;CL:0000738,1.10e-07,136;CL:0000359,6.95e-07,32;CL:0002087,7.34e-07,115;CL:0002031,9.64e-07,120;CL:0000134,9.85e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.27e-20;42 | |ontology_enrichment_development_v019=CL:0002057;1.27e-20;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.09e-23!80;UBERON:0002193!4.49e-23!112;UBERON:0001474!8.29e-22!86;UBERON:0002390!1.29e-21!102;UBERON:0003061!1.29e-21!102;UBERON:0002405!9.44e-21!115;UBERON:0002204!1.49e-20!167;UBERON:0003081!1.12e-19!216;UBERON:0004765!6.26e-19!101;UBERON:0001434!6.26e-19!101;UBERON:0000926!1.07e-10!448;UBERON:0004120!1.07e-10!448;UBERON:0006603!1.07e-10!448;UBERON:0000468!4.90e-10!659;UBERON:0000467!1.09e-09!625;UBERON:0000480!1.70e-09!626;UBERON:0002050!1.03e-07!605;UBERON:0005423!1.03e-07!605;UBERON:0000923!1.34e-07!604;UBERON:0005291!1.34e-07!604;UBERON:0006598!1.34e-07!604;UBERON:0002532!1.34e-07!604;UBERON:0000922!6.60e-07!612;UBERON:0004535!7.19e-07!110 | |ontology_enrichment_uberon=UBERON:0002371!1.09e-23!80;UBERON:0002193!4.49e-23!112;UBERON:0001474!8.29e-22!86;UBERON:0002390!1.29e-21!102;UBERON:0003061!1.29e-21!102;UBERON:0002405!9.44e-21!115;UBERON:0002204!1.49e-20!167;UBERON:0003081!1.12e-19!216;UBERON:0004765!6.26e-19!101;UBERON:0001434!6.26e-19!101;UBERON:0000926!1.07e-10!448;UBERON:0004120!1.07e-10!448;UBERON:0006603!1.07e-10!448;UBERON:0000468!4.90e-10!659;UBERON:0000467!1.09e-09!625;UBERON:0000480!1.70e-09!626;UBERON:0002050!1.03e-07!605;UBERON:0005423!1.03e-07!605;UBERON:0000923!1.34e-07!604;UBERON:0005291!1.34e-07!604;UBERON:0006598!1.34e-07!604;UBERON:0002532!1.34e-07!604;UBERON:0000922!6.60e-07!612;UBERON:0004535!7.19e-07!110 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.96e-24,76;UBERON:0002405,7.88e-24,93;UBERON:0002193,9.69e-23,108;UBERON:0001474,1.10e-22,82;UBERON:0002390,4.72e-22,98;UBERON:0003061,4.72e-22,98;UBERON:0003081,1.19e-20,203;UBERON:0004765,6.02e-19,90;UBERON:0002204,2.16e-17,167;UBERON:0001434,3.95e-17,100;UBERON:0000926,1.53e-12,315;UBERON:0004120,1.53e-12,315;UBERON:0006603,1.53e-12,315 | |||
|phase1_expression=4.54195948176392,3.21150785836475,16.6326196833246,5.00366491765652,12.0679495495368,18.3191090061077,0,1.26343974685366,0,10.5665592695649,0,0,0,0,0.662794751455832,4.70627602516243,1.80808358407193,4.38186054232424,4.39139518911456,0,0,0,0,0,0,0,0,0,20.8483066729919,21.1106168953467,19.8164637844577,0,0,0,0,0,0,16.0658668474244,32.2876560426928,26.2583153566181,21.2719700527928,66.3982015338908,24.4696789252477,25.735488263983,40.4327259747026,19.1641408338375,92.2743276515568,88.4010959246925,118.30783368193,55.524631718175,46.3650878817672,53.2085017249317,88.9443856300476,83.2675241823136,94.7985406160392,44.6134344715973,57.8561038122633,72.8104089602074,43.4639127166682,61.2974441715339,46.032273057531,6.26717470354761,11.1699648268114,7.2458207590558,9.57690487474327,13.0498601678962,11.2108004819203,70.3496262718881,66.2283306393656,76.4504733362011,7.87019353423379,25.7794345191295,12.6584954976354,49.6449922833063,22.5360557962946,23.4817682969381,25.4985992702544,22.9770646047505,26.3589962183211,13.9656244433212,4.77400025277816,8.21988691940853,0,0.546138611262131,0,0.426730222566507,0,0,0,0,1.1384259382189,0.587237189370939,0.764546456250458,0,6.1655941927969,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,1.24930726552346,1.65744076430812,0,0,0,0,2.43806866313962,29.51083782696,8.69465420536006,0.361439152384566,0.50133791063589,0.579386075843295,0,2.43317435151318,0,0,0.087834785693126,3.99486180268024,0,0.370784442784429,0.649094787309367,0.696518949197069,1.46253756570752,0.953962497221368,1.14398982156026,0.74291500265913,0.39752481473341,0,0,1.13061588384802,1.25849830862972,0.275118041940067,1.25396979922086,0.258416759169329,2.13459757612026,0.66944122552934,0,23.5684352772739,0,1.47065232138347,0.81014194788176,0.267899184852239,0,0.337834441449967,0,0.949265659568129,0.549605231791222,0,7.75560528296651,0,0,0.759783069987479,3.04541115870403,1.43418310374407,3.90135220418193,0.560677600142307,5.33744978648525,0,1.24484414159907,0.808264032418128,4.41347138406339,0.756787138224657,0,0,0,1.1409436430889,1.04614076386261,0.587172493218824,0.485618833104395,0.280901613404497,1.22492502752936,0.245668634623536,1.54988671763648,0,0.494533858557114,3.64064544775211,2.15585442544872,0.168336113954066,0.375355559615893,4.98715407871529,0.438977620880838,3.67785354958824,6.61047459189026,6.12533789064114,2.15267562826634,0.213557388818567,1.05965950579781,0.600182192168805,1.54578793857658,2.83404594050192,1.48893485065272,1.18143432568886,1.94874010322397,1.00973509697646,0.644349290496095,0.969876340912871,1.77504796258307,1.30977727695932,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,1.18306800039844,1.01150814046861,0.964044119533928,1.8749975364507,1.74303555273925,1.18635309555548,1.07865046528132,1.17732879075208,2.69323009862473,0,0,2.4694440679884,0,1.26755034821831,64.8665963007233,41.9460833743797,0,70.4723752852041,26.0783071653759,0.109750285408626,0,0.201057944823262,0,0.325808305310325,0,0,0,0.70445216541493,8.95071976118658,21.2973335785241,4.75635380586496,0,0,53.92152433314,12.8702345826581,26.4563468873936,0,0.16798212819886,0,0.0895585227028483,0,0,1568.14708622279,0,8.29312462163088,10.8089965062721,2.77733353538036,44.2580323216418,158.907185032244,114.873098265846,73.5611517897632,27.5577680444907,53.1607212383734,46.5897085187842,0,0.87192013766656,0.36669142910475,14.0906170175978,0,5.071816515336,55.5810663662379,56.1640159321377,1.54324424557285,0,1.3321108950805,6.86294369559108,27.6737018749636,10.70212437815,2.60588947434988,4.6200953336531,17.4229412045354,18.9906807547539,19.1737360892065,39.7892504904587,90.0015976744809,124.559758675167,86.441915188043,0,0,0,0,11.9176267079222,1.07436577943937,0,1.37921532141349,0,0.513372145118994,0,0,0,0.837581326671744,0,0.749007023947182,0,1.65766205374414,0.613457458595699,2.00068208423871,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,2.27407504055985,1.03473071292505,0,2.58116835958384,2.69339204851057,0.195801157462741,0,8.06395301879261,12.0799952458425,12.2736691473961,0,0,0.30239029332968,7.44323423456331,1.84154367945675,2.24528075546459,17.4269242987753,12.7926812266676,24.2889420926847,13.3576259800492,1.85051632563187,1.24293207719189,1.14978018419333,5.19254429183621,1.97557643381931,22.2381387248585,0,0,0.803701137152247,0.910455840033585,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,2.89159298970077,0.215915916102139,0,1.08378575017541,0,0.254876273045038,0,0,0,0,7.43705362837529,0.656029291399411,9.43597344526479,2.88514832613622,0,0.165018999841176,0,0,3.21367859688319,0,0.924291702687866,0.15350367472613,0.689182862422653,0.214840489736547,0.725083469571143,0.255679882248303,0,0,0,0,0.10115778085555,9.761756535243,11.333244485903,1.3940745403212,11.0892088863392,4.7907542728532,5.21959795245044,4.07713282028624,1.28812398067792,0,0.316379424718726,2.47819252100972,0,0,1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| ||
|short_description=p2@SGK1 | |short_description=p2@SGK1 | ||
}} | }} |
Latest revision as of 21:21, 24 September 2015
Short description: | p2@SGK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SGK1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000525700, ENST00000532021_5end |
EntrezGene: | SGK1 |
HGNC: | 10810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.02e-32 | 48 |
phagocyte | 1.02e-32 | 48 |
myeloid leukocyte | 2.13e-28 | 72 |
classical monocyte | 3.25e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.25e-28 | 42 |
monopoietic cell | 1.75e-27 | 59 |
monocyte | 1.75e-27 | 59 |
monoblast | 1.75e-27 | 59 |
promonocyte | 1.75e-27 | 59 |
granulocyte monocyte progenitor cell | 2.45e-27 | 67 |
macrophage dendritic cell progenitor | 5.06e-27 | 61 |
myeloid lineage restricted progenitor cell | 6.48e-27 | 66 |
myeloid cell | 8.04e-12 | 108 |
common myeloid progenitor | 8.04e-12 | 108 |
multi fate stem cell | 1.77e-09 | 427 |
somatic stem cell | 1.19e-08 | 433 |
stem cell | 6.05e-08 | 441 |
leukocyte | 1.10e-07 | 136 |
vascular associated smooth muscle cell | 6.95e-07 | 32 |
nongranular leukocyte | 7.34e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 9.64e-07 | 120 |
mesenchymal cell | 9.85e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.96e-24 | 76 |
immune system | 7.88e-24 | 93 |
hemolymphoid system | 9.69e-23 | 108 |
bone element | 1.10e-22 | 82 |
hematopoietic system | 4.72e-22 | 98 |
blood island | 4.72e-22 | 98 |
lateral plate mesoderm | 1.19e-20 | 203 |
skeletal element | 6.02e-19 | 90 |
musculoskeletal system | 2.16e-17 | 167 |
skeletal system | 3.95e-17 | 100 |
mesoderm | 1.53e-12 | 315 |
mesoderm-derived structure | 1.53e-12 | 315 |
presumptive mesoderm | 1.53e-12 | 315 |