FFCP PHASE1:Hg19::chr1:110466067..110466076,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:110466067..110466076,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_at_chr1:110466067..110466076,+ | |description=CAGE_peak_at_chr1:110466067..110466076,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002274!1.49e-09!5;CL:0000457!1.49e-09!5;CL:0002191!1.49e-09!5;CL:0000097!1.49e-09!5;CL:0000831!1.49e-09!5;CL:0002028!1.49e-09!5 | |ontology_enrichment_celltype=CL:0002274!1.49e-09!5;CL:0000457!1.49e-09!5;CL:0002191!1.49e-09!5;CL:0000097!1.49e-09!5;CL:0000831!1.49e-09!5;CL:0002028!1.49e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.39e-40;5!CL:0000163;6.22e-23;9!CL:1000487;2.90e-12;2!CL:0000135;1.30e-08;3!CL:0002521;1.30e-08;3!CL:0000388;1.30e-08;3 | |ontology_enrichment_celltype_v019=CL:0000097;1.39e-40;5!CL:0000163;6.22e-23;9!CL:1000487;2.90e-12;2!CL:0000135;1.30e-08;3!CL:0002521;1.30e-08;3!CL:0000388;1.30e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.30e-40,5;CL:0002028,1.30e-40,5;CL:0000163,5.99e-23,9;CL:1000487,2.32e-12,2;CL:0000135,1.21e-08,3;CL:0000388,1.21e-08,3;CL:0002521,1.40e-08,3;CL:0000839,1.93e-08,66;CL:0000557,2.55e-08,67;CL:0000766,9.34e-08,72 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.30e-08;3!DOID:127;1.30e-08;3!DOID:0060072;9.10e-07;4 | |ontology_enrichment_disease_v019=DOID:0060084;1.30e-08;3!DOID:127;1.30e-08;3!DOID:0060072;9.10e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.30e-08,3;DOID:127,1.30e-08,3;DOID:0060072,9.11e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002204!4.63e-07!167 | |ontology_enrichment_uberon=UBERON:0002204!4.63e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.30e-08;3!UBERON:0000043;1.30e-08;3!UBERON:0007845;1.30e-08;3!UBERON:0002190;1.30e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0007846;1.30e-08;3!UBERON:0000043;1.30e-08;3!UBERON:0007845;1.30e-08;3!UBERON:0002190;1.30e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.21e-08,3;UBERON:0000043,1.21e-08,3;UBERON:0007845,1.21e-08,3;UBERON:0002190,1.40e-08,3;UBERON:0002371,2.34e-07,76;UBERON:0001474,7.87e-07,82 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0,0,0.446961094427288,0,0,0,1.04474251279935,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0.709446689665756,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.502497330513487,1.0429658368404,0.868755378820466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.512365278902701,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0.427114777637135,0.211931901159562,0,0,0,0.37223371266318,0.168776332241266,0,0.252433774244115,0.276149695926898,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0.352193736052904,4.35389042635621,2.30591925467138,3.28230326908588,0,0.381988425558278,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,2.10833939483032,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0.42793898803392,0,0,0,0.54907405947211,0.353437207037059,0,0,0,0,0.487426979262569,0,0,1.1312434556297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,1.08599920350743,0,0.653174720218818,0,0.246277562248017,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0.50313580350515,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.54503513781167,0.642301571672949,0,0,0.446961094427288,0,0,0,1.04474251279935,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0.709446689665756,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.502497330513487,1.0429658368404,0.868755378820466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.512365278902701,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0.427114777637135,0.211931901159562,0,0,0,0.37223371266318,0.168776332241266,0,0.252433774244115,0.276149695926898,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0.352193736052904,4.35389042635621,2.30591925467138,3.28230326908588,0,0.381988425558278,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,2.10833939483032,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0.42793898803392,0,0,0,0.54907405947211,0.353437207037059,0,0,0,0,0.487426979262569,0,0,1.1312434556297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,1.08599920350743,0,0.653174720218818,0,0.246277562248017,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0.50313580350515,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:110466067..110466076,+ | |short_description=p@chr1:110466067..110466076,+ | ||
}} | }} |
Latest revision as of 19:27, 27 July 2015
Short description: | p@chr1:110466067..110466076, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:110466067..110466076, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.30e-40 | 5 |
basophil mast progenitor cell | 1.30e-40 | 5 |
endocrine cell | 5.99e-23 | 9 |
smooth muscle cell of prostate | 2.32e-12 | 2 |
fibrocyte | 1.21e-08 | 3 |
tendon cell | 1.21e-08 | 3 |
subcutaneous fat cell | 1.40e-08 | 3 |
myeloid lineage restricted progenitor cell | 1.93e-08 | 66 |
granulocyte monocyte progenitor cell | 2.55e-08 | 67 |
myeloid leukocyte | 9.34e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.21e-08 | 3 |
tendon | 1.21e-08 | 3 |
regular connective tissue | 1.21e-08 | 3 |
subcutaneous adipose tissue | 1.40e-08 | 3 |
bone marrow | 2.34e-07 | 76 |
bone element | 7.87e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.30e-08 | 3 |
leiomyoma | 1.30e-08 | 3 |
benign neoplasm | 9.11e-07 | 4 |