FFCP PHASE1:Hg19::chr4:2794785..2794802,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6452 | |EntrezGene=6452 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10825 | |HGNC=10825 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAB4 | |UniProt=D6RAB4 | ||
|association_with_transcript=0bp_to_ENST00000503219,ENST00000512131_5end | |association_with_transcript=0bp_to_ENST00000503219,ENST00000512131_5end | ||
|cluster_id=chr4:2794785..2794802,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_4_at_SH3BP2_5end | |description=CAGE_peak_4_at_SH3BP2_5end | ||
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|ontology_enrichment_celltype=CL:0000766!1.27e-34!76;CL:0000557!6.66e-31!71;CL:0002009!4.47e-29!65;CL:0002194!4.40e-28!63;CL:0000576!4.40e-28!63;CL:0000040!4.40e-28!63;CL:0000559!4.40e-28!63;CL:0002057!1.06e-27!42;CL:0000839!1.70e-27!70;CL:0000860!8.77e-27!45;CL:0000763!1.29e-18!112;CL:0000049!1.29e-18!112;CL:0000738!1.49e-12!140;CL:0002031!7.46e-10!124;CL:0002087!1.92e-09!119;CL:0000988!4.97e-08!182;CL:0002032!2.66e-07!165;CL:0000837!2.66e-07!165;CL:0000037!3.90e-07!172;CL:0000566!3.90e-07!172;CL:0002393!9.42e-07!9;CL:0002397!9.42e-07!9 | |ontology_enrichment_celltype=CL:0000766!1.27e-34!76;CL:0000557!6.66e-31!71;CL:0002009!4.47e-29!65;CL:0002194!4.40e-28!63;CL:0000576!4.40e-28!63;CL:0000040!4.40e-28!63;CL:0000559!4.40e-28!63;CL:0002057!1.06e-27!42;CL:0000839!1.70e-27!70;CL:0000860!8.77e-27!45;CL:0000763!1.29e-18!112;CL:0000049!1.29e-18!112;CL:0000738!1.49e-12!140;CL:0002031!7.46e-10!124;CL:0002087!1.92e-09!119;CL:0000988!4.97e-08!182;CL:0002032!2.66e-07!165;CL:0000837!2.66e-07!165;CL:0000037!3.90e-07!172;CL:0000566!3.90e-07!172;CL:0002393!9.42e-07!9;CL:0002397!9.42e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.12e-21;33!CL:0002057;2.12e-21;33!CL:0000473;1.03e-20;39!CL:0000234;1.03e-20;39!CL:0000576;2.05e-18;48!CL:0000766;5.76e-16;69 | |ontology_enrichment_celltype_v019=CL:0000860;2.12e-21;33!CL:0002057;2.12e-21;33!CL:0000473;1.03e-20;39!CL:0000234;1.03e-20;39!CL:0000576;2.05e-18;48!CL:0000766;5.76e-16;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.13e-36,72;CL:0000473,6.12e-32,48;CL:0000234,6.12e-32,48;CL:0000557,7.09e-32,67;CL:0002009,5.16e-30,61;CL:0002194,5.53e-29,59;CL:0000576,5.53e-29,59;CL:0000040,5.53e-29,59;CL:0000559,5.53e-29,59;CL:0000860,9.75e-29,42;CL:0002057,9.75e-29,42;CL:0000839,1.91e-28,66;CL:0000763,1.55e-18,108;CL:0000049,1.55e-18,108;CL:0000738,2.76e-14,136;CL:0002031,1.43e-11,120;CL:0002087,5.29e-11,115;CL:0000988,2.38e-09,177;CL:0002032,2.72e-08,161;CL:0000837,2.72e-08,161;CL:0000037,3.70e-08,168;CL:0002393,5.86e-07,9;CL:0002397,5.86e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.74e-21;42 | |ontology_enrichment_development_v019=CL:0002057;4.74e-21;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.48e-33!102;UBERON:0003061!1.48e-33!102;UBERON:0002193!5.40e-30!112;UBERON:0002371!1.15e-29!80;UBERON:0001474!5.68e-28!86;UBERON:0002405!1.63e-25!115;UBERON:0004765!8.39e-19!101;UBERON:0001434!8.39e-19!101;UBERON:0007023!8.98e-13!115;UBERON:0003081!1.52e-12!216;UBERON:0000062!4.29e-10!511;UBERON:0002050!4.02e-09!605;UBERON:0005423!4.02e-09!605;UBERON:0000467!5.79e-09!625;UBERON:0000923!5.91e-09!604;UBERON:0005291!5.91e-09!604;UBERON:0006598!5.91e-09!604;UBERON:0002532!5.91e-09!604;UBERON:0000480!1.09e-08!626;UBERON:0000922!1.16e-08!612;UBERON:0000468!2.52e-08!659;UBERON:0000178!1.13e-07!15;UBERON:0000179!1.13e-07!15;UBERON:0000463!1.13e-07!15;UBERON:0001049!2.04e-07!57;UBERON:0005068!2.04e-07!57;UBERON:0006241!2.04e-07!57;UBERON:0007135!2.04e-07!57;UBERON:0002204!2.06e-07!167;UBERON:0002616!5.30e-07!59;UBERON:0000479!9.25e-07!787;UBERON:0000926!9.67e-07!448;UBERON:0004120!9.67e-07!448;UBERON:0006603!9.67e-07!448 | |ontology_enrichment_uberon=UBERON:0002390!1.48e-33!102;UBERON:0003061!1.48e-33!102;UBERON:0002193!5.40e-30!112;UBERON:0002371!1.15e-29!80;UBERON:0001474!5.68e-28!86;UBERON:0002405!1.63e-25!115;UBERON:0004765!8.39e-19!101;UBERON:0001434!8.39e-19!101;UBERON:0007023!8.98e-13!115;UBERON:0003081!1.52e-12!216;UBERON:0000062!4.29e-10!511;UBERON:0002050!4.02e-09!605;UBERON:0005423!4.02e-09!605;UBERON:0000467!5.79e-09!625;UBERON:0000923!5.91e-09!604;UBERON:0005291!5.91e-09!604;UBERON:0006598!5.91e-09!604;UBERON:0002532!5.91e-09!604;UBERON:0000480!1.09e-08!626;UBERON:0000922!1.16e-08!612;UBERON:0000468!2.52e-08!659;UBERON:0000178!1.13e-07!15;UBERON:0000179!1.13e-07!15;UBERON:0000463!1.13e-07!15;UBERON:0001049!2.04e-07!57;UBERON:0005068!2.04e-07!57;UBERON:0006241!2.04e-07!57;UBERON:0007135!2.04e-07!57;UBERON:0002204!2.06e-07!167;UBERON:0002616!5.30e-07!59;UBERON:0000479!9.25e-07!787;UBERON:0000926!9.67e-07!448;UBERON:0004120!9.67e-07!448;UBERON:0006603!9.67e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.23e-08;15!UBERON:0000179;7.23e-08;15!UBERON:0000463;7.23e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;7.23e-08;15!UBERON:0000179;7.23e-08;15!UBERON:0000463;7.23e-08;15 | ||
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| ||
|short_description=p4@SH3BP2 | |short_description=p4@SH3BP2 | ||
}} | }} |
Latest revision as of 12:14, 17 September 2015
Short description: | p4@SH3BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SH3BP2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000503219, ENST00000512131_5end |
EntrezGene: | SH3BP2 |
HGNC: | 10825 |
UniProt: | D6RAB4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.13e-36 | 72 |
defensive cell | 6.12e-32 | 48 |
phagocyte | 6.12e-32 | 48 |
granulocyte monocyte progenitor cell | 7.09e-32 | 67 |
macrophage dendritic cell progenitor | 5.16e-30 | 61 |
monopoietic cell | 5.53e-29 | 59 |
monocyte | 5.53e-29 | 59 |
monoblast | 5.53e-29 | 59 |
promonocyte | 5.53e-29 | 59 |
classical monocyte | 9.75e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.75e-29 | 42 |
myeloid lineage restricted progenitor cell | 1.91e-28 | 66 |
myeloid cell | 1.55e-18 | 108 |
common myeloid progenitor | 1.55e-18 | 108 |
leukocyte | 2.76e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 1.43e-11 | 120 |
nongranular leukocyte | 5.29e-11 | 115 |
hematopoietic cell | 2.38e-09 | 177 |
hematopoietic oligopotent progenitor cell | 2.72e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.72e-08 | 161 |
hematopoietic stem cell | 3.70e-08 | 168 |
intermediate monocyte | 5.86e-07 | 9 |
CD14-positive, CD16-positive monocyte | 5.86e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.58e-34 | 98 |
blood island | 1.58e-34 | 98 |
hemolymphoid system | 1.48e-30 | 108 |
bone marrow | 1.61e-30 | 76 |
bone element | 3.52e-28 | 82 |
skeletal element | 9.96e-26 | 90 |
immune system | 9.28e-24 | 93 |
skeletal system | 2.53e-19 | 100 |
lateral plate mesoderm | 6.44e-13 | 203 |
adult organism | 7.80e-13 | 114 |
germ layer | 2.71e-08 | 560 |
germ layer / neural crest | 2.71e-08 | 560 |
embryonic tissue | 2.71e-08 | 560 |
presumptive structure | 2.71e-08 | 560 |
germ layer / neural crest derived structure | 2.71e-08 | 560 |
epiblast (generic) | 2.71e-08 | 560 |
musculoskeletal system | 6.32e-08 | 167 |
blood | 6.49e-08 | 15 |
haemolymphatic fluid | 6.49e-08 | 15 |
organism substance | 6.49e-08 | 15 |
embryo | 6.84e-08 | 592 |
embryonic structure | 6.96e-08 | 564 |
developing anatomical structure | 9.40e-08 | 581 |
neural tube | 6.41e-07 | 56 |
neural rod | 6.41e-07 | 56 |
future spinal cord | 6.41e-07 | 56 |
neural keel | 6.41e-07 | 56 |