FFCP PHASE1:Hg19::chr16:67440262..67440282,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:67440262..67440282,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr16:67440262..67440282,- | |description=CAGE_peak_at_chr16:67440262..67440282,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000062;1.09e-15;9!CL:0000346;2.74e-12;3!CL:1000428;2.74e-12;3!CL:0002559;6.78e-08;5!CL:0000138;8.72e-07;6 | |ontology_enrichment_celltype_v019=CL:0000062;1.09e-15;9!CL:0000346;2.74e-12;3!CL:1000428;2.74e-12;3!CL:0002559;6.78e-08;5!CL:0000138;8.72e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000062,5.10e-13,11;CL:0000375,5.10e-13,11;CL:0000335,5.10e-13,11;CL:0000346,2.59e-12,3;CL:1000428,2.59e-12,3;CL:0002559,6.55e-08,5;CL:0000058,9.49e-07,6;CL:0000138,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.86e-18;2!CL:0000335;4.95e-13;11 | |ontology_enrichment_development_v019=UBERON:0007297;9.86e-18;2!CL:0000335;4.95e-13;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.55e-09!115 | |ontology_enrichment_uberon=UBERON:0007023!1.55e-09!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;5.97e-34;1!UBERON:0003135;4.66e-13;11!UBERON:0000412;2.74e-12;3!UBERON:0001992;2.74e-12;3!UBERON:0006947;2.74e-12;3!UBERON:0004054;2.74e-12;3!UBERON:0005904;1.50e-09;4!UBERON:0002073;6.78e-08;5!UBERON:0003101;5.17e-07;22!UBERON:0000079;5.17e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0001301;5.97e-34;1!UBERON:0003135;4.66e-13;11!UBERON:0000412;2.74e-12;3!UBERON:0001992;2.74e-12;3!UBERON:0006947;2.74e-12;3!UBERON:0004054;2.74e-12;3!UBERON:0005904;1.50e-09;4!UBERON:0002073;6.78e-08;5!UBERON:0003101;5.17e-07;22!UBERON:0000079;5.17e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.61e-34,1;UBERON:0003135,4.25e-13,11;UBERON:0006947,2.31e-12,3;UBERON:0004054,2.31e-12,3;UBERON:0000412,2.59e-12,3;UBERON:0001992,2.59e-12,3;UBERON:0005904,1.32e-09,4;UBERON:0002073,6.55e-08,5;UBERON:0005086,6.55e-08,5;UBERON:0003101,4.94e-07,22;UBERON:0000079,4.94e-07,22 | |||
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| ||
|short_description=p@chr16:67440262..67440282,- | |short_description=p@chr16:67440262..67440282,- | ||
}} | }} |
Latest revision as of 11:25, 25 July 2015
Short description: | p@chr16:67440262..67440282, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:67440262..67440282, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 5.10e-13 | 11 |
osteoprogenitor cell | 5.10e-13 | 11 |
mesenchyme condensation cell | 5.10e-13 | 11 |
hair follicle dermal papilla cell | 2.59e-12 | 3 |
stem cell of epidermis | 2.59e-12 | 3 |
hair follicle cell | 6.55e-08 | 5 |
chondroblast | 9.49e-07 | 6 |
chondrocyte | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
epididymis | 3.61e-34 | 1 |
male reproductive organ | 4.25e-13 | 11 |
male genital duct | 2.31e-12 | 3 |
internal male genitalia | 2.31e-12 | 3 |
dermal papilla | 2.59e-12 | 3 |
papillary layer of dermis | 2.59e-12 | 3 |
duct of male reproductive system | 1.32e-09 | 4 |
hair follicle | 6.55e-08 | 5 |
hair follicle placode | 6.55e-08 | 5 |
male organism | 4.94e-07 | 22 |
male reproductive system | 4.94e-07 | 22 |