FFCP PHASE1:Hg19::chr21:17791874..17791892,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:17791874..17791892,+
|short_description=p6@LINC00478
|description=CAGE_peak_6_at_LINC00478_5end
|association_with_transcript=36bp_to_ENST00000453910_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |HGNC=1274 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_ENST00000453910_5end | |||
|cluster_id=chr21:17791874..17791892,+ | |||
|coexpression_cluster_id=C4069 | |||
|description=CAGE_peak_6_at_LINC00478_5end | |||
|id=chr21:17791874..17791892,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.04e-22!115;UBERON:0001017!3.99e-15!82;UBERON:0005743!2.43e-14!86;UBERON:0000073!8.18e-14!94;UBERON:0001016!8.18e-14!94;UBERON:0001049!2.40e-12!57;UBERON:0005068!2.40e-12!57;UBERON:0006241!2.40e-12!57;UBERON:0007135!2.40e-12!57;UBERON:0000477!2.69e-12!286;UBERON:0000955!6.55e-12!69;UBERON:0006238!6.55e-12!69;UBERON:0002616!2.68e-11!59;UBERON:0000468!4.99e-11!659;UBERON:0002346!7.73e-10!90;UBERON:0003075!9.23e-10!86;UBERON:0007284!9.23e-10!86;UBERON:0000924!2.45e-09!173;UBERON:0006601!2.45e-09!173;UBERON:0000153!2.55e-09!129;UBERON:0007811!2.55e-09!129;UBERON:0003080!3.32e-09!42;UBERON:0004121!3.55e-09!169;UBERON:0002780!9.37e-09!41;UBERON:0001890!9.37e-09!41;UBERON:0006240!9.37e-09!41;UBERON:0000033!1.06e-08!123;UBERON:0000922!1.52e-08!612;UBERON:0002050!1.70e-08!605;UBERON:0005423!1.70e-08!605;UBERON:0004111!1.76e-08!241;UBERON:0000467!1.84e-08!625;UBERON:0000480!2.46e-08!626;UBERON:0000923!3.85e-08!604;UBERON:0005291!3.85e-08!604;UBERON:0006598!3.85e-08!604;UBERON:0002532!3.85e-08!604;UBERON:0002020!1.97e-07!34;UBERON:0003528!1.97e-07!34;UBERON:0001893!3.13e-07!34;UBERON:0002791!3.98e-07!33;UBERON:0000481!4.06e-07!347;UBERON:0001869!6.34e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.36e-08;9!UBERON:0001557;2.36e-08;9!UBERON:0001044;1.33e-07;6!UBERON:0003293;1.33e-07;6!UBERON:0003294;1.33e-07;6!UBERON:0010047;1.33e-07;6!UBERON:0003408;1.33e-07;6!UBERON:0000167;1.33e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.78e-12,114;UBERON:0011216,4.37e-10,223;UBERON:0001737,2.08e-08,9;UBERON:0001044,1.72e-07,6;UBERON:0003293,1.72e-07,6;UBERON:0003294,1.72e-07,6;UBERON:0010047,1.72e-07,6;UBERON:0000167,1.72e-07,6;UBERON:0001017,2.48e-07,81 | |||
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| ||
|short_description=p6@LINC00478 | |||
}} | }} |
Latest revision as of 19:47, 17 September 2015
Short description: | p6@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LINC00478_5end |
Coexpression cluster: | C4069_medulloblastoma_uterus_cervix_ovary_trachea_heart_throat |
Association with transcript: | 36bp_to_ENST00000453910_5end |
EntrezGene: | NA |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.78e-12 | 114 |
organ system subdivision | 4.37e-10 | 223 |
larynx | 2.08e-08 | 9 |
saliva-secreting gland | 1.72e-07 | 6 |
gland of oral region | 1.72e-07 | 6 |
gland of foregut | 1.72e-07 | 6 |
oral gland | 1.72e-07 | 6 |
oral cavity | 1.72e-07 | 6 |
central nervous system | 2.48e-07 | 81 |