FFCP PHASE1:Hg19::chr16:65159902..65159909,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:65159902..65159909,- | |||
|coexpression_cluster_id=C2382 | |coexpression_cluster_id=C2382 | ||
|description=CAGE_peak_at_chr16:65159902..65159909,- | |description=CAGE_peak_at_chr16:65159902..65159909,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000708!3.71e-11!3;CL:0002549!3.64e-09!2;CL:0000077!6.39e-09!19 | |ontology_enrichment_celltype=CL:0000708!3.71e-11!3;CL:0002549!3.64e-09!2;CL:0000077!6.39e-09!19 | ||
|ontology_enrichment_celltype_v019=CL:0002549;7.48e-30;2!CL:0002568;2.21e-15;1!CL:0000077;2.30e-07;19 | |ontology_enrichment_celltype_v019=CL:0002549;7.48e-30;2!CL:0002568;2.21e-15;1!CL:0000077;2.30e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002549,6.96e-30,2;CL:0002568,2.38e-15,1;CL:0000077,2.27e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.21e-15;1 | |ontology_enrichment_development_v019=UBERON:0010115;2.21e-15;1 | ||
|ontology_enrichment_disease=DOID:2394!2.26e-12!14 | |ontology_enrichment_disease=DOID:2394!2.26e-12!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005284!1.54e-12!5;UBERON:0003210!3.71e-11!3;UBERON:0000992!9.79e-10!13;UBERON:0003947!3.64e-09!2;UBERON:0005629!3.64e-09!2;UBERON:0005358!3.64e-09!2;UBERON:0001886!3.64e-09!2;UBERON:0004086!3.64e-09!2;UBERON:0005282!3.64e-09!2;UBERON:0005281!3.64e-09!2;UBERON:0002119!5.43e-09!4;UBERON:0004531!5.43e-09!4 | |ontology_enrichment_uberon=UBERON:0005284!1.54e-12!5;UBERON:0003210!3.71e-11!3;UBERON:0000992!9.79e-10!13;UBERON:0003947!3.64e-09!2;UBERON:0005629!3.64e-09!2;UBERON:0005358!3.64e-09!2;UBERON:0001886!3.64e-09!2;UBERON:0004086!3.64e-09!2;UBERON:0005282!3.64e-09!2;UBERON:0005281!3.64e-09!2;UBERON:0002119!5.43e-09!4;UBERON:0004531!5.43e-09!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;7.48e-30;2!UBERON:0005358;7.48e-30;2!UBERON:0001886;7.48e-30;2!UBERON:0004086;7.48e-30;2!UBERON:0005282;7.48e-30;2!UBERON:0005281;7.48e-30;2!UBERON:0002363;2.21e-15;1!UBERON:0001282;2.21e-15;1!UBERON:0009842;2.21e-15;1!UBERON:0003704;2.21e-15;1!UBERON:0001171;2.21e-15;1!UBERON:0001172;2.21e-15;1!UBERON:0005284;1.46e-12;5!UBERON:0002360;2.40e-08;2!UBERON:0000094;2.40e-08;2!UBERON:0010743;2.40e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0005629;7.48e-30;2!UBERON:0005358;7.48e-30;2!UBERON:0001886;7.48e-30;2!UBERON:0004086;7.48e-30;2!UBERON:0005282;7.48e-30;2!UBERON:0005281;7.48e-30;2!UBERON:0002363;2.21e-15;1!UBERON:0001282;2.21e-15;1!UBERON:0009842;2.21e-15;1!UBERON:0003704;2.21e-15;1!UBERON:0001171;2.21e-15;1!UBERON:0001172;2.21e-15;1!UBERON:0005284;1.46e-12;5!UBERON:0002360;2.40e-08;2!UBERON:0000094;2.40e-08;2!UBERON:0010743;2.40e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,6.96e-30,2;UBERON:0005358,6.96e-30,2;UBERON:0001886,6.96e-30,2;UBERON:0004086,6.96e-30,2;UBERON:0005282,6.96e-30,2;UBERON:0005281,6.96e-30,2;UBERON:0002363,3.17e-15,1;UBERON:0007645,3.17e-15,1;UBERON:0007647,3.17e-15,1;UBERON:0010115,3.17e-15,1;UBERON:0001282,3.66e-15,1;UBERON:0009842,3.66e-15,1;UBERON:0003704,3.66e-15,1;UBERON:0001171,3.66e-15,1;UBERON:0001172,3.66e-15,1;UBERON:0005284,1.42e-12,5;UBERON:0002360,2.87e-08,2;UBERON:0000094,2.87e-08,2;UBERON:0010743,2.87e-08,2 | |||
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| ||
|short_description=p@chr16:65159902..65159909,- | |short_description=p@chr16:65159902..65159909,- | ||
}} | }} |
Latest revision as of 10:59, 25 July 2015
Short description: | p@chr16:65159902..65159909, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:65159902..65159909, - |
Coexpression cluster: | C2382_large_Fibroblast_Mesothelial_Mesenchymal_mesothelioma_mesenchymal_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 6.96e-30 | 2 |
mesenchymal stem cell of Wharton's jelly | 2.38e-15 | 1 |
mesothelial cell | 2.27e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 6.96e-30 | 2 |
ventricle of nervous system | 6.96e-30 | 2 |
choroid plexus | 6.96e-30 | 2 |
brain ventricle | 6.96e-30 | 2 |
ventricular system of brain | 6.96e-30 | 2 |
ventricular system of central nervous system | 6.96e-30 | 2 |
dura mater | 3.17e-15 | 1 |
future meninx | 3.17e-15 | 1 |
ectomeninx | 3.17e-15 | 1 |
future dura mater | 3.17e-15 | 1 |
intralobular bile duct | 3.66e-15 | 1 |
acinus | 3.66e-15 | 1 |
intrahepatic bile duct | 3.66e-15 | 1 |
portal lobule | 3.66e-15 | 1 |
hepatic acinus | 3.66e-15 | 1 |
brain vasculature | 1.42e-12 | 5 |
meninx | 2.87e-08 | 2 |
membrane organ | 2.87e-08 | 2 |
meningeal cluster | 2.87e-08 | 2 |